Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1538 ATGGGTAGCGAAGAATTCAGGAAGGAAGACTTCATGGAAGACGATGATGAAGAAGTTGAACTTCCAGGGTTTCGGTTTCATCCCACTGATGAAGAACTCGTGGGTTTCTATCTTCGAAGGCAGCTCGACAAGAAACCGATCAGGATCGAACTCATCAAGCAGATCGATATTTACAAATACGATCCCTGGGACCTTCCAAAAGCGAGCAGCACGGGAGGGGAGAAGGAGTGGTACTTTTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGCATAAGGCCGAATAGAGTGACGGGATCAGGGTTCTGGAAAGCGACAGGGATAGACAAGCCTGTGTACTCTCTAGGAGGAGAAGCCAGCCATTGCATTGGCCTCAAGAAAACTCTTGTTTACTACAGAGGCAGTGCAGGTAAAGGCTGCAAAACTGACTGGATGATGCACGAGTTTCGCCTCCCTTCTCCTCAAGACGCCGCCGCCACCAACACCGTCAATCCCCCCGCCGCCGCCCTCCAAGAAGCTGAAATATGGACGTTGTGCCGAATTTTCAAGCGAAACGTTCCACCAAGAAAGCACATAACAGACTGGAGATCGCCACAAGCAGGTGCGAAACGTCAATATTCTTCAATCGAGAAGAACACAAGACTTGTAAGCAGTAGCAGCGTTGTGGACCATAGTAACTACAACAACAATAACAAAGAAGCTTACATCAATTTTGGAGGAAGCAATCATCATCATCATGATGGTCATTATTATTCTCAGGTTAATCATCATGATCATGATCATGGCCATCATCATGAGCATAAACCAACAGTGTTCAATAACTACAGCAACAATACTAACATTGATCAGAGGAATAATAATCAGTTCATGATGATGAACTGCCAAGCAGAAGCACAACCACCACAGTTAATCACTGCTTCTTCTTCTTCGTCGTCTTCTAATTACTTGTGGATTAATAACCATTCTGCTGCTGCTGCCAATCACGACTTCTTGACGTATGAGAACTGGGATGAACTTGGATCGGTTGTGAAGTTCGCTCTTGATTCCTCTATCCTGTAA 1056 0.4555 MGSEEFRKEDFMEDDDEEVELPGFRFHPTDEELVGFYLRRQLDKKPIRIELIKQIDIYKYDPWDLPKASSTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLGGEASHCIGLKKTLVYYRGSAGKGCKTDWMMHEFRLPSPQDAAATNTVNPPAAALQEAEIWTLCRIFKRNVPPRKHITDWRSPQAGAKRQYSSIEKNTRLVSSSSVVDHSNYNNNNKEAYINFGGSNHHHHDGHYYSQVNHHDHDHGHHHEHKPTVFNNYSNNTNIDQRNNNQFMMMNCQAEAQPPQLITASSSSSSSNYLWINNHSAAAANHDFLTYENWDELGSVVKFALDSSIL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1538 351 ProSiteProfiles NAC domain profile. 20 183 IPR003441 GO:0003677|GO:0006355
Prci7g1538 351 FunFam NAC domain-containing protein 35 29 186 - -
Prci7g1538 351 Gene3D NAC domain 29 185 IPR036093 GO:0003677|GO:0006355
Prci7g1538 351 Pfam No apical meristem (NAM) protein 22 150 IPR003441 GO:0003677|GO:0006355
Prci7g1538 351 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Prci7g1538 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1538 Prci-Chr7 31320548 31322761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1538 17 253 NAC Transcription Factor Family AT5G39820 48.606 1.39e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1538 NAM 3e-35 No_clan