Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1535 ATGAAAGAGGGTGGTGGCAGATCAAAGCATGGCACAATGTCGCCATGTGCAGCTTGCAAGCTTCTGCGAAGAAGATGTGCACATGATTGTGTGTTTGCTCCTTATTTTCCTGCTGATGAACCCCAGAAATTTGCAAGTGTTCATAAAGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGCACCAACGCAGTGATGCAGTGAGTTCAATGGTATATGAAGCAAACGCAAGAGTGAGAGACCCTGTGTATGGCTGTGTGGGAGCCATCTCTTCTCTGCAACACCAAGTTGACTTGCTTCAGACCCAGCTCGCCATTGCTCAAGCCGAAGTTGTTCACATGAGATCACTCAGTCACTTCTCTTCTTCATCTTCACCCCCACCACCAACTACAACTCTGACTGTGCCTTCCACGTCATCGCCAGATCATCATCACAGTAACTTCAATACGTCTCCTTCATCGTCGAGCAGGCTCAGCGCCAAGTCCTTTTTTGCCATGGACGTGGGCGAGTCTTTGTGGTCGTGCTAG 540 0.4833 MKEGGGRSKHGTMSPCAACKLLRRRCAHDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDLLQTQLAIAQAEVVHMRSLSHFSSSSSPPPPTTTLTVPSTSSPDHHHSNFNTSPSSSSRLSAKSFFAMDVGESLWSC 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1535 179 Coils Coil 94 114 - -
Prci7g1535 179 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Prci7g1535 179 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Prci7g1535 179 MobiDBLite consensus disorder prediction 123 160 - -
Prci7g1535 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 150 - -
Prci7g1535 179 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1535 Prci-Chr7 31283471 31288371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1535 1 179 AS2 family AT1G16530 57.459 5.89e-66 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci7g1535 LOB 1.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1535 - - mnt:21399316 234.958