Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1511 ATGCCGCCTCCTTCTATCACATTCATGCCATACCCCAAGCACGCTCCTCCTATGGCCTCCTCCACCTCAACCCTCCTGTCTTCCAACCCTAGGGTTTTCTCTTCCATCATCTCCGATCATCACCATCATCACTCTCCTCTCTCTCAATGTCCCGCCGTCCCCAAATCCTTCAGTGGCCTCTGCAAACCTTTCCATTCTCGAGTTCCCACTTCGATTCGTCGTCGAGGCTTCTTCGTCAAGGCTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCGCCCAACTGTGACACTGATTTCCAAAAGAAAGTCCTGTATCTAGAGTCCATTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCCACTGTGATCTCTGCCTCCTCTCTTCCTGATATAAAATCCACTGTGGAATTCATGACATCCATGGATTTCTCTGCAATTGAGTTCCGACGAATTGTGGGCATGTGCCCAGAGATTCTTACCTCCAGAGTATCAGATATCTTACCTGTCTTCACCTTCCTTCTCCGTGAAGCTTGTGTGAATGGTTCAGATATCAAGCATGCCATAAACCGCCGTCCCAGGTTGCTTGTCTGCAGTGTCACCGAGCAACTTCGTCCCACCCTGTACTTTCTCCAAAGCATTGGAATTGAAGAGGTAAACAGGCACACATACTTACTATCATGCAGTGTTGAAGAAAAGCTTATTCCCAGGATTGATTACTTTGAGAATATCGGCTTTTCTCGCCGTGATGCAACTTCAATGTTTCGAAGATTCCCTCAGCTGTTTAACTATAGTATTAAGAACAACTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAGGTAAAAGAATTCCCGCAGTATTTCTCGTTTAGCTTAGAGACTAGAATCAAACCTAGGCATAAACGCTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGTATTATTAAAGACAAATGAAGCGCTATTTCGTAATAGATTAGACGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTTTATGGTGTTCAAATTGTGAAGTTTATTAA 1080 0.4398 MPPPSITFMPYPKHAPPMASSTSTLLSSNPRVFSSIISDHHHHHSPLSQCPAVPKSFSGLCKPFHSRVPTSIRRRGFFVKATVIKWRCPKQILPPNCDTDFQKKVLYLESIGIDSFSLIENHPTVISASSLPDIKSTVEFMTSMDFSAIEFRRIVGMCPEILTSRVSDILPVFTFLLREACVNGSDIKHAINRRPRLLVCSVTEQLRPTLYFLQSIGIEEVNRHTYLLSCSVEEKLIPRIDYFENIGFSRRDATSMFRRFPQLFNYSIKNNLEPKYKYFVVEMGRDLKEVKEFPQYFSFSLETRIKPRHKRCVEMGVCFPLPVLLKTNEALFRNRLDVCVNSSTPLKTSPLWCSNCEVY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1511 359 Pfam mTERF 87 179 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 Pfam mTERF 226 332 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 PANTHER CGI-12 PROTEIN-RELATED 114 337 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 254 286 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 152 182 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 220 249 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Prci7g1511 359 FunFam Transcription termination factor MTEF1, chloroplastic 176 340 - -
Prci7g1511 359 Gene3D Transcription termination factor 3, mitochondrial 116 340 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1511 Prci-Chr7 31134512 31136975 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci7g1511 mTERF 4.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1511 K15031 - gmx:100794678 522.702