Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1506 ATGATTCGTCCTCTATCAACAGTCTCACGTCGTTTTCAGCCTTTCTCTACAGGCATTGCTTCAAAACCCTCGCAAGCATTCACTTCCGCCACCCGTTCGACAAAATGTCTGGCCCAAGTTAAAGAGGCAGAGGAAGAAGCTGCAGGTCAACCTATAGACTCTGTTCAAGTTTTCAGGAAATGGGGTTGTAATGATGATGATTTAGCCAGAATTTTTGAACGGAACCCACAATTGCGCAAAGCTGATATTGCCCTGCTTCAAGCGAATCTCTCTGTGCTTAGTCGCTTGGGGCTAAAGGCACCTGACTTGGTAAGGATAATCAATTGTAGGCCTAAGTTTCTTCTTATTAGTCAAGTTCATCGTTATTTTGATGATAGATTTGTATATCTTAATTCATTGTTTGAGTCGAAGGAATTGCTTAAGAGAGCCATCGTGACTAACCCTTCTCTCCTAACCTTTAATTTTAACTCCATTGAACCTGCTCTTGCAAAATATCAAGAATTGGGTGTAAAGAAAGAAGAATTTCTTGCCTTGATCTGTACCCGGCCCACAATAATTCCAAGGACTTCATTTAATGAGGAGAAGCTTGAATATATACGAAAGACAGGGCTTTCCCCGAATTCAAAGTTGTATAAATATGTGGTTGCAATAGTCGGCGTCTATCGTATGGAAACAATTGATGAGAAGTTAACGAATTTTGCCAACTTTGGATTCTCTGATGATGAGATATTTGAGCTTATTAGGCGGCATCCTCTTGTCATGACACTGTCAATCGAGAAGATTCAGAGGAATATGACCTTCATATTGACCGCAATGAAGTTTGATGCTAAAACTGTTCTTGAAATCCCGCGTCTCCTGTTTATAAATCTGGATACGTTGTTGAGGCCAAGAGTTCTCCTAGTAAGGAGGTTACAGGACATGGATGTTAAGTTAGAATTTACACACCGTTCAATAATTCGCGCTTTGAGGATGAAAGAGACTAGGTTTGTTCAGTTTTTCATTGAAAGCCAACCTAAGGAAGTTGCCAATGAGTTAATGGAGTTCTATACCAAAGCGAAACAAATTAAGAGTCTAGCAGGGTCAAGAAAGAGGTTTATTCAAAAAGGCTTTCCATTTTGA 1119 0.4004 MIRPLSTVSRRFQPFSTGIASKPSQAFTSATRSTKCLAQVKEAEEEAAGQPIDSVQVFRKWGCNDDDLARIFERNPQLRKADIALLQANLSVLSRLGLKAPDLVRIINCRPKFLLISQVHRYFDDRFVYLNSLFESKELLKRAIVTNPSLLTFNFNSIEPALAKYQELGVKKEEFLALICTRPTIIPRTSFNEEKLEYIRKTGLSPNSKLYKYVVAIVGVYRMETIDEKLTNFANFGFSDDEIFELIRRHPLVMTLSIEKIQRNMTFILTAMKFDAKTVLEIPRLLFINLDTLLRPRVLLVRRLQDMDVKLEFTHRSIIRALRMKETRFVQFFIESQPKEVANELMEFYTKAKQIKSLAGSRKRFIQKGFPF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1506 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 SMART mt_12 276 310 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 Gene3D Transcription termination factor 3, mitochondrial 119 343 IPR038538 -
Prci7g1506 372 Gene3D Transcription termination factor 3, mitochondrial 35 118 IPR038538 -
Prci7g1506 372 PANTHER CGI-12 PROTEIN-RELATED 15 336 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 Pfam mTERF 128 329 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 Pfam mTERF 56 117 IPR003690 GO:0003690|GO:0006355
Prci7g1506 372 FunFam Mitochondrial transcription termination factor family protein 123 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1506 Prci-Chr7 31055274 31057730 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci7g1506 mTERF 4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1506 K15031 - qsa:O6P43_001216 385.185