Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1505 TATGAATTTGAAGGAAGCGCGCTCTCATGCTTCGTCTTTTATCAACTTTCTCACGTCGTTTTTCTGCTGTCTTCGACCGCGAAACCTTCCCAACTATTCACTTCTGCCACCTGTTCGACCAAATGCTTAGCCCAAGTTGAAGAGGCAGCGAAAAACACTACAGCTCAATCAACCGATGCTGTTCAAGTTTTTAGGGAATGGGGTTGTAATGATGAGGATTTGGCGAAAATTTTGAAACGTAACCCATGTTTGCGCAAATCTAAAGCTGCGCTGCTTCAGTCGAAGCTCGCTCTGCTAAGTCGCTACGGGCTAAAGGCCCCTGACCTGGTGAGGATAATCAATTGTAGGCCAAGGTTTCTTAGCTCCCGGGTTAATCGTTTCTTCGCCGAGAGGCTTTCATATCTTAATTCATTGTTTGAGTCGCAGGCATTGCTTAAGAGAGCCCTTGTGACGAATCCTTCACTCTTAATCTATGATTTTAACAAAACCATTCAACCTGTTCTTGCACAATATGAAGAGTTGGGTGTAAACAGAGATGACTTTCTTTTCATGATCTGTTCTCGGCCCACACTTATTTCGAGGACTTCATTTAATGAGGAGAAGCTGGAATATATACGCAAGACTGGTTTAACCACGGATTCAAAGAGGTATAAATATGTTGTAGCAATAATTGGCGTCTCTCGTCTGGAAACAATCCGTGAGAAGATGGCACATTTTGCCAAATTTGGTTTCTCTGATGAAGAGATATTTCAATTTATTGGGCGGTCTCCTTTTGTCTTGACACTGTCAATTGAAAAGGTTCAGAGGAACATGACGTTCGTGTTGGGCACAATTAATTTGGAAGCGAAAATAGTTCTTGAGAATCCACATCTCTTGTTTTTAAACCTAGATAACAAGTTGAAACCTCGGTTTTTCCTGATGAGGAAGATAGGAGACATGGATTCTAAGTTGAAATGTACACAGCCTTCAGTGATTAGTGCTCTGAGGATGAAAGAAAAGAGGTTCATGAAGGCATTCATCGAATGCCATAGCAAGGAAGTGGCCAATGAGTTGTTGGAGTTCTATATGAAGGCAAAAGAAGTGAAGAGATTAGCAGAATCATCGAGGAAGCATGTTTGTCTAGGATTTCCATTTTGA 1137 0.4169 YEFEGSALSCFVFYQLSHVVFLLSSTAKPSQLFTSATCSTKCLAQVEEAAKNTTAQSTDAVQVFREWGCNDEDLAKILKRNPCLRKSKAALLQSKLALLSRYGLKAPDLVRIINCRPRFLSSRVNRFFAERLSYLNSLFESQALLKRALVTNPSLLIYDFNKTIQPVLAQYEELGVNRDDFLFMICSRPTLISRTSFNEEKLEYIRKTGLTTDSKRYKYVVAIIGVSRLETIREKMAHFAKFGFSDEEIFQFIGRSPFVLTLSIEKVQRNMTFVLGTINLEAKIVLENPHLLFLNLDNKLKPRFFLMRKIGDMDSKLKCTQPSVISALRMKEKRFMKAFIECHSKEVANELLEFYMKAKEVKRLAESSRKHVCLGFPF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1505 378 FunFam Mitochondrial transcription termination factor family protein 128 349 - -
Prci7g1505 378 Gene3D Transcription termination factor 3, mitochondrial 128 349 IPR038538 -
Prci7g1505 378 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 SMART mt_12 182 211 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 PANTHER CGI-12 PROTEIN-RELATED 41 344 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 Pfam mTERF 62 154 IPR003690 GO:0003690|GO:0006355
Prci7g1505 378 Pfam mTERF 123 335 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1505 Prci-Chr7 31052708 31054006 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci7g1505 mTERF 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1505 K15031 - qsa:O6P43_001216 396.356