Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1496 ATGGATCAATCGGAGCAGGCACAACAGCAGCAGCAGCAAAAGCATGTAGTAGGCGTTGCAGCTGCCCCTGGCCAGATGGCCTATTCTACTCACTACCAGACTGCTCCCATGGTAGCATCTGGAACATCTTCTGTAGCCGTAACTTCCCCAACACAGCCTCCAGCTCCCTTCTCGAATTCCCCTCACCAAATGGCATACCAGCAAGCACATCATTTTCACCACCAGCAGCAGCAGCAGCAACAGCAGCAGCTTCAGATTTTTTGGGCTAACCAAATGCAAGAAATTGAGCAGACAACTGACTTCAAGAATCATAGTCTTCCACTTGCAAGGATAAAGAAAATAATGAAAGCTGATGAGGATGTCCGGATGATCTCAGCGGAGGCACCAGTCATATTTGCAAAAGCATGTGAAATGTTTATCCTGGAGCTGACTCTGCGATCATGGATACACACGGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCGGCTGCAATTTCAAGGACTGACGTATTTGATTTCTTGGTTGATATTATTCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGTGTGACAAAAGCTACAATTCCAGTTGTGGGTTCCCCTACTGATATGCCATATTATTATGTCCCACCACAGCATCCTGTAGGGCCTACTGGGATGATCATGGGAAAACCAGTTGACCAGGCAGCACTATATGCCACCCAACAGCCTCGACCTCATATGGCGTTCATGCCGTGGCCACAGACACAACCTCCACAACAGCCACCGCACGATCAGCAGCAAACAGACACTTGA 804 0.4764 MDQSEQAQQQQQQKHVVGVAAAPGQMAYSTHYQTAPMVASGTSSVAVTSPTQPPAPFSNSPHQMAYQQAHHFHHQQQQQQQQQLQIFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVVGSPTDMPYYYVPPQHPVGPTGMIMGKPVDQAALYATQQPRPHMAFMPWPQTQPPQQPPHDQQQTDT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1496 267 Gene3D Histone, subunit A 66 183 IPR009072 GO:0046982
Prci7g1496 267 MobiDBLite consensus disorder prediction 245 267 - -
Prci7g1496 267 FunFam Nuclear transcription factor Y subunit gamma 71 183 - -
Prci7g1496 267 SUPERFAMILY Histone-fold 62 177 IPR009072 GO:0046982
Prci7g1496 267 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 59 247 - -
Prci7g1496 267 Pfam Core histone H2A/H2B/H3/H4 52 168 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1496 Prci-Chr7 30981633 30984663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1496 59 212 CCAAT-HAP5 Transcription Factor Family AT1G56170 89.032 1.20e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci7g1496 Histone 4.1e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1496 K08066 - jre:109011255 378.252