LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1487	ATGGCAGCTGTCAAGGGAAAATCTAAAGTGGGTTTAACCCGGGTCTTTGAAGATGGCCAATCTCGTAAAAATTCGGGTGCTAGAAATTTTAAAGTTTTGCCTGAAAATGAGCAGCTCAAAATAGATGATGATGGGCTCGCGAAACCAGCAACAGGAGCCAGTGAACATGCAAGAAGGAGTGCTTTGGTGGCTAACAAAGGGGTTGTCATGAATACTGCTAGCAACTCAAAGGTTGGCTTGAAAAGTATGAAGAAAAGCAGTGGCATCTATGGTAGTTCTGCAAATATGAAAGCGAGAAAGGCACTGGCTGATGTTAGCAACGTTCAAGGCAACTCTATGAGGAATATTAAACAGGATGCTTCTAAAATGAAGGTTTTAGCCAGCACAGGTACCAAGTTGGGCGATGCCTCTTCAAGGAAGTCCTTTATGGGGAGACTGCACAGGAAAATAATTCAAGTTGATGGTCAGTTAGAAGCTTCTAAGAGAGCAGTGAGCACTAGCTCAATACCACCCTTAGGTGCTCAGAAGATTAATAAAAGTGGAGGAAGATCATCTATTGCCACAGAGGGCAGGACCACTAGGAAGTCTCTCTTACCTAGTTTGACAAGGAGGTCTTTACCTGTGCCAAGGAGGGTCAATAGGGAGGACATGAGCAACAGAAAGGGAAATGCTGGAAGTTCTGATACTGCAAAGAAAATAAGTGGGATATCAACTAAGGAAGAAACAGTGAGAAAAGTTGCCCCCCAATTATCTGGTGCAACAAGCCATCTACGGAAGACTCGAGTGAGTGATGGCCATGTTCATATTAATCTGGGAGCCAGGGTTAAAACCAATGTTTTATATGCATCCTCAAGGAAGTCTACCAAACCTCTTGTTAAGCGCACACTTAAGGCTTCTAACGCTCCAAGGACTTCAAAATCTAAGTCCAAATCAGCTGCCGCAATTTCATCACAGGATGAGGAGGCAGTTGCTTTGTCTCTCCCTGATAATAATTTACCTGTGGTTTCCAACGATGCATATGAAGGGCAGCTTCCATCTGGTGGAGACAGCAACCCAAGAACAAGTTCATTGGAGATAATTGGAAGGAAAAAGTCCACCCGTCGAAAATCTTACACAACTTTGTTAATGGAAAGATCTAAGCTTCTCAAGGAAAGTGGTGAAATGACTGAACAAGATAACCTACCAAATATCGATGATGAATGCAATCAACTAGAAGTTTCTGAGTATGTTGATGATATATATCAGTACTATTGGGTTACTGAGGCACAAGCTCCGGCTCTGATGAGTTATATGTCAATTCAGACGGACCTTACACCTCATATGCGTGGCATACTGATAAACTGGTTAATTGAAGTACACTTGAAATATGAGTTGATGCCAGAAACCCTGTATCTCACAGTTTCGTTATTGGATCAATATCTATCTCTAGTGGCAATTGAAAAGAATGAATTGCAGTTAGTTGGTCTAACCGCACTTCTGCTGGCATCAAAATATGAAGATTTTTGGCATCCTAGTGTCAAAGAGTTACTAAGCATTTCAGTTGAATCATATACGAGAGAACAAATACTAGGGATGGAGAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGGCCCCACTCCTTATGTTTTTATGGTGAGGTTTTTGAAGGCTGCTCAGTCAGACAAGAGGCTGGAACACTTGGCATTCTTTCTTATTGAACTGTGCTTGGTTGAATATGAAGCCTTGGCATTCAAGTCTTCACTGGTATGTGCATCTGCCATCTATGTTGCTCGTTGCACCCTGCAAATTGCCCCACCATGGACGCCATTGCTGCACAAGCATTGTCGTTATGAAGTTTCCCAATTAAGGAATTGTGCAGAGATGATATTGAAGTTCCACAAATCAGCTAGAGCAGGAAATCTGATGGTTACATGTGAAAAATATTCAAGGCCTGAACTAAGTAGGGTTGCAACCCTGAAACCTTTGGACAACCTTCCTCTCTGA	1989	0.4213	MAAVKGKSKVGLTRVFEDGQSRKNSGARNFKVLPENEQLKIDDDGLAKPATGASEHARRSALVANKGVVMNTASNSKVGLKSMKKSSGIYGSSANMKARKALADVSNVQGNSMRNIKQDASKMKVLASTGTKLGDASSRKSFMGRLHRKIIQVDGQLEASKRAVSTSSIPPLGAQKINKSGGRSSIATEGRTTRKSLLPSLTRRSLPVPRRVNREDMSNRKGNAGSSDTAKKISGISTKEETVRKVAPQLSGATSHLRKTRVSDGHVHINLGARVKTNVLYASSRKSTKPLVKRTLKASNAPRTSKSKSKSAAAISSQDEEAVALSLPDNNLPVVSNDAYEGQLPSGGDSNPRTSSLEIIGRKKSTRRKSYTTLLMERSKLLKESGEMTEQDNLPNIDDECNQLEVSEYVDDIYQYYWVTEAQAPALMSYMSIQTDLTPHMRGILINWLIEVHLKYELMPETLYLTVSLLDQYLSLVAIEKNELQLVGLTALLLASKYEDFWHPSVKELLSISVESYTREQILGMEKLILRKLKFRLNGPTPYVFMVRFLKAAQSDKRLEHLAFFLIELCLVEYEALAFKSSLVCASAIYVARCTLQIAPPWTPLLHKHCRYEVSQLRNCAEMILKFHKSARAGNLMVTCEKYSRPELSRVATLKPLDNLPL	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1487	662	SUPERFAMILY	Cyclin-like	402	538	IPR036915	-
	Prci7g1487	662	Gene3D	-	427	532	-	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	298	316	-	-
	Prci7g1487	662	CDD	CYCLIN_CCNB1-like_rpt1	406	535	-	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	285	316	-	-
	Prci7g1487	662	Pfam	Cyclin, N-terminal domain	412	538	IPR006671	-
	Prci7g1487	662	SMART	cyclin_7	544	626	IPR013763	-
	Prci7g1487	662	SMART	cyclin_7	447	531	IPR013763	-
	Prci7g1487	662	Gene3D	-	533	661	-	-
	Prci7g1487	662	FunFam	Cyclin N-terminal domain containing 2	427	535	-	-
	Prci7g1487	662	SUPERFAMILY	Cyclin-like	540	659	IPR036915	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	161	200	-	-
	Prci7g1487	662	PANTHER	CYCLINS	367	626	IPR039361	-
	Prci7g1487	662	SMART	Cyclin_C_2	540	657	IPR004367	-
	Prci7g1487	662	Pfam	Cyclin, C-terminal domain	540	656	IPR004367	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	1	28	-	-
	Prci7g1487	662	FunFam	putative cyclin-B3-1 isoform X3	536	661	-	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	219	233	-	-
	Prci7g1487	662	MobiDBLite	consensus disorder prediction	161	235	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1487	Prci-Chr7	30916644	30923822	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1487	28	662	Core Cell Cycle Gene Families	AT1G16330	46.260	3.56e-171	502

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1487	K21777		-	gmx:100808850	705.286