Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1481 ATGAGAAGTGGCCTTTTTCTCCTCTATCTGACTCTATCATTTATTTCTCTCATTCATTGCGATGCAGAGAGTTCAATGAGAGAATCAAAAGGTCAAAAACATGGGAGAATTTTGGCACACAAGCATGCGAAGAAGTTGAGGATGGCTTTCAAGCATTTTGAATTGTCTTCTTTAGAATTTTCAAATGCACAAAGTGTTGACTCATCATCTCCTTTGCCGCCTTATGAATCTCTGGCTCCTATTCCTTTACAACAAAATAGCCCTCCTTTTAGTTATCCTCCCCCACCTCCAATGGGCCTCCAATTACCGCCTCCAGGCCCAACTGGATCTCTTCCCACACCAACACCACAAAGTATCCCAAACCCTCCTGACATGGGTTCGCCCTTACAAAATCCTCCAATTATCATCCCCAGCCCACCAGGTAACATTCCAGGCTCACCTGGGTCTACAACAAGCCCACCAAGTACCATCCCGTCCCCAAGTGGAGGCACTGGGCCTAACTCACCTGAACCAATACAAAATCCTCCTATTGTTCTTCCAAGCCCACCTGGCTCTATGACAAGCCCACCAAGCACTATCCCATCTCCAAGTGGAGGTATTGGGCCAGGCTCACCTGAACCGATACAAAATCCACCAAGTACTCGCACGCCTCCAAATGAAGGTTCTACTCCTGGCTCCCCAGAACCAATACAAAACCCTCCTATTGTTCTTCCAAGCCCACCTGGATCAGCCACAAGCCCACCAGGCACAAATCCATCTCCTAGTGGAGGCAATGTGCCCAGCCCAACAGTGTTTGAGCCTCCTGTAGTATTTCCACCACCTTCTGTGCCTCCCCCTCCTGGCCGCAAGGCCCCAAGTGGAGCCTTATGGTGCGTGGCTAAGCCATCAGTTCCGGACCCAATACTGCAAGAAGCCATGAACTATGCTTGCGGGTTAGGAGGAGATTGTGATCCCATTCGGCCCAATGGGCCTTGCTTTGAGCCCGACACTGTTATTGCACACACTTCATTTGCTTTCAATGGCTACTGGCAAAATTCCAAGGCTTCTGGTGGGACCTGTGACTTTGGAGGGACTGGCATGCTGGTGTCAGAGGACCCAAGCTATGATGGATGCCACTTTGTCTATAGTTAG 1131 0.496 MRSGLFLLYLTLSFISLIHCDAESSMRESKGQKHGRILAHKHAKKLRMAFKHFELSSLEFSNAQSVDSSSPLPPYESLAPIPLQQNSPPFSYPPPPPMGLQLPPPGPTGSLPTPTPQSIPNPPDMGSPLQNPPIIIPSPPGNIPGSPGSTTSPPSTIPSPSGGTGPNSPEPIQNPPIVLPSPPGSMTSPPSTIPSPSGGIGPGSPEPIQNPPSTRTPPNEGSTPGSPEPIQNPPIVLPSPPGSATSPPGTNPSPSGGNVPSPTVFEPPVVFPPPSVPPPPGRKAPSGALWCVAKPSVPDPILQEAMNYACGLGGDCDPIRPNGPCFEPDTVIAHTSFAFNGYWQNSKASGGTCDFGGTGMLVSEDPSYDGCHFVYS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1481 376 MobiDBLite consensus disorder prediction 64 285 - -
Prci7g1481 376 Gene3D - 284 374 - -
Prci7g1481 376 FunFam Glucan endo-1,3-beta-glucosidase 4 284 376 - -
Prci7g1481 376 SMART X8_cls 289 373 IPR012946 -
Prci7g1481 376 PRINTS Proline rich extensin signature 100 121 - -
Prci7g1481 376 PRINTS Proline rich extensin signature 86 98 - -
Prci7g1481 376 PRINTS Proline rich extensin signature 143 160 - -
Prci7g1481 376 PRINTS Proline rich extensin signature 162 187 - -
Prci7g1481 376 PRINTS Proline rich extensin signature 126 142 - -
Prci7g1481 376 PRINTS Proline rich extensin signature 66 82 - -
Prci7g1481 376 MobiDBLite consensus disorder prediction 205 248 - -
Prci7g1481 376 MobiDBLite consensus disorder prediction 169 190 - -
Prci7g1481 376 MobiDBLite consensus disorder prediction 86 154 - -
Prci7g1481 376 PANTHER BETA-1,3 GLUCANASE 285 373 IPR044788 -
Prci7g1481 376 MobiDBLite consensus disorder prediction 265 284 - -
Prci7g1481 376 Pfam X8 domain 289 360 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1481 Prci-Chr7 30906620 30909435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1481 283 373 Glycoside Hydrolase AT2G05790 47.826 4.88e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1481 - - gmx:100794886 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1481 7 30906620 30909435 Prci7g1481 7 30906620 30909435 ECH