Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1431 ATGGATGCAAAGACTGTTGCTTCTCAGCTTAATAGTTCTGGTCTGCTGCGGACTCAGGGCCTTATTGGAGGCAAATGGAGTGATGCCTATGATGGCAAAACCATAAAGGTTTATAATCCAGCAACCGGTGAATCTATAACAGATATTGCATGCATGGGTGGAAGAGAGACAAATGATGCGATATCTTCAGCCTATGATGCATTTCAATCTTGGAGCAAAACTACTGCTGCTGAGAGGAGTAAACTTCTGAGAAAATGGTATGATTTGCTAATGGCGCACAAGGAAGGGCTTGCTCAACTCATAACCTTAGAGCAAGGAAAGCCTCTTAAAGAATCTATTGGGGAGATAAATTATGGGGCTAGTTTTATTGAGTTTTCGGCAGAGGAGGCAAAGCGTGTATATGGAGATATAATTCCTGCACCGCTACCTGATCGACGGCTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGGAAGGTTGGTCCAGCCCTTGCGTGTGGCTGTACAGTGGTCATTAAGCCCTCTGAACTTACTCCTCTCACAGCGTTGGCTTCAGCAGAGCTTGCAATTCAAGCTGGAATACCAGCGGGTGTTGTGAATATAGTAATGGGAAATGCTCCTGAAATTGGGGATGCTATACTTGCAAGTCCACAGGTAAGGAAGATTACATTTACGGGCTCAACAGCAGTTGGAAAAAAGTTGATGACAGGTGCTGCTGGAACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTGTTGCAGCGAAGTTCCGTAATAGTGGACAAACATGTGTATGTGCCAATCGAATTCTTGTGCAAGAAGGTATCTATGAGAAATTTGCAGCTGCTATTCTTGAAGCTGTTAAGAATATGAAAGTTGGGGACGGTTTTAGTGAAGGTGTGGTTCAGGGGCCTCTAATCAATGAAGCTGCCGTTGAAAAGGTGGAATCCTTACTTCATGATGCTACCTCAAAGGGAGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACGTTTTATGAGCCTACAGTTGTCACTGATGTCAACAATGAGATGCGCATATCAAGAGAGGAAGTGTTTGGACCAGTTGCTCCTCTTTTGAGATTTAAAACTGAGGAGGAGGCTATCAAGATCGCCAACGACACTAATGCAGGGTTGGGTTCGTATATATTTACGAACAGTGTTCAACGTTCTTGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTCGGTGTAAATGAAGGAGTAATTTCAACGGAGGTTGCTCCATTTGGCGGGGTCAAACAGTCTGGCCTTGGAAGAGAGGGCTCCAAATATGGAATGGATGAATATTTGGAGATCAAATATGTCTGCTTGGGAAACATGAACAAAGACTGA 1482 0.4386 MDAKTVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESITDIACMGGRETNDAISSAYDAFQSWSKTTAAERSKLLRKWYDLLMAHKEGLAQLITLEQGKPLKESIGEINYGASFIEFSAEEAKRVYGDIIPAPLPDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALASAELAIQAGIPAGVVNIVMGNAPEIGDAILASPQVRKITFTGSTAVGKKLMTGAAGTVKRVSLELGGNAPCIIFDDADLDVAVKGTVAAKFRNSGQTCVCANRILVQEGIYEKFAAAILEAVKNMKVGDGFSEGVVQGPLINEAAVEKVESLLHDATSKGAKVILGGKRHSLGSTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNSVQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1431 493 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
Prci7g1431 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 454 IPR016163 GO:0016620
Prci7g1431 493 FunFam Succinate-semialdehyde dehydrogenase I 265 454 - -
Prci7g1431 493 CDD ALDH_F5_SSADH_GabD 37 487 - -
Prci7g1431 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Prci7g1431 493 SUPERFAMILY ALDH-like 13 491 IPR016161 GO:0016491
Prci7g1431 493 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 12 490 - -
Prci7g1431 493 FunFam Aldehyde dehydrogenase, putative 457 483 - -
Prci7g1431 493 FunFam Succinate-semialdehyde dehydrogenase I 32 275 - -
Prci7g1431 493 Pfam Aldehyde dehydrogenase family 28 485 IPR015590 GO:0016491
Prci7g1431 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 479 IPR016162 GO:0016491
Prci7g1431 493 NCBIfam succinate-semialdehyde dehydrogenase 37 483 IPR010102 GO:0009013|GO:0009450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1431 Prci-Chr7 30222491 30235173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1431 1 492 Aldehyde Dehydrogenase Gene Family AT1G79440 80.285 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1431 K17761 - gmx:100808318 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1431 7 30222491 30235173 Prci7g1431 7 30222491 30235173 ECH