Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1430 ATGACGCTGGCTTCCGCAGCATTGAGCTTACGCTTGTCAATGAAATCTTGGCAGCTCATCCCTCGCTCTTTACATTTGGTCTCCATGCAGACCACTGGCCCTTCCTTCGCTCGCCAGATAAGCATGGATGCAAAGACTGTTGCTTCTCAGCTTAATAGTTCTGGTCTGCTGCGGACTCAGGGCCTTATTGGAGGCAAATGGAGTGATGCCTATGATGGCAAAACCATAAAGGTTTATAATCCAGCAACCGGTGAATCTATAACAGATATTGCATGCATGGGTGGAAGAGAGACAAATGATGCGATATCTTCAGCCTATGATGCATTTCAATCTTGGAGCAAAACTACTGCTGCTGAGAGGAGTAAACTTCTGAGAAAATGGTATGATTTGCTAATGGCGCACAAGGAAGGGCTTGCTCAACTCATAACCTTAGAGCAAGGAAAGCCTCTTAAAGAATCTATTGGGGAGATAAATTATGGGGCTAGTTTTATTGAGTTTTCGGCAGAGGAGGCAAAGCGTGTATATGGAGATATAATTCCTGCACCGCTACCTGATCGACGGCTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGGAAGGTTGGTCCAGCCCTTGCGTGTGGCTGTACAGTGGTCATTAAGCCCTCTGAACTTACTCCTCTCACAGCGTTGGCTTCAGCAGAGCTTGCAATTCAAGCTGGAATACCAGCGGGTGTTGTGAATATAGTAATGGGAAATGCTCCTGAAATTGGGGATGCTATACTTGCAAGTCCACAGGTAAGGAAGATTACATTTACGGGCTCAACAGCAGTTGGAAAAAAGTTGATGACAGGTGCTGCTGGAACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTGTTGCAGCGAAGTTCCGTAATAGTGGACAAACATGTGTATGTGCCAATCGAATTCTTGTGCAAGAAGGTATCTATGAGAAATTTGCAGCTGCTATTCTTGAAGCTGTTAAGAATATGAAAGTTGGGGACGGTTTTAGTGAAGGTGTGGTTCAGGGGCCTCTAATCAATGAAGCTGCCGTTGAAAAGGTGGAATCCTTACTTCATGATGCTACCTCAAAGGGAGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACGTTTTATGAGCCTACAGTTGTCACTGATGTCAACAATGAGATGCGCATATCAAGAGAGGAAGTGTTTGGACCAGTTGCTCCTCTTTTGAGATTTAAAACTGAGGAGGAGGCTATCAAGATCGCCAACGACACTAATGCAGGGTTGGGTTCGTATATATTTACGAACAGTGTTCAACGTTCTTGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTCGGTGTAAATGAAGGAGTAATTTCAACGGAGGTTGCTCCATTTGGCGGGGTCAAACAGTCTGGCCTTGGAAGAGAGGGCTCCAAATATGGAATGGATGAATATTTGGAGATCAAATATGTCTGCTTGGGAAACATGAACAAAGACTGA 1605 0.4455 MTLASAALSLRLSMKSWQLIPRSLHLVSMQTTGPSFARQISMDAKTVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESITDIACMGGRETNDAISSAYDAFQSWSKTTAAERSKLLRKWYDLLMAHKEGLAQLITLEQGKPLKESIGEINYGASFIEFSAEEAKRVYGDIIPAPLPDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALASAELAIQAGIPAGVVNIVMGNAPEIGDAILASPQVRKITFTGSTAVGKKLMTGAAGTVKRVSLELGGNAPCIIFDDADLDVAVKGTVAAKFRNSGQTCVCANRILVQEGIYEKFAAAILEAVKNMKVGDGFSEGVVQGPLINEAAVEKVESLLHDATSKGAKVILGGKRHSLGSTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNSVQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1430 534 NCBIfam succinate-semialdehyde dehydrogenase 78 524 IPR010102 GO:0009013|GO:0009450
Prci7g1430 534 FunFam Aldehyde dehydrogenase, putative 498 524 - -
Prci7g1430 534 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Prci7g1430 534 FunFam Succinate-semialdehyde dehydrogenase I 306 495 - -
Prci7g1430 534 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 531 - -
Prci7g1430 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Prci7g1430 534 CDD ALDH_F5_SSADH_GabD 78 528 - -
Prci7g1430 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 520 IPR016162 GO:0016491
Prci7g1430 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Prci7g1430 534 Pfam Aldehyde dehydrogenase family 69 526 IPR015590 GO:0016491
Prci7g1430 534 FunFam Succinate-semialdehyde dehydrogenase I 73 316 - -
Prci7g1430 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1430 Prci-Chr7 30222491 30235429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1430 23 533 Aldehyde Dehydrogenase Gene Family AT1G79440 79.061 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1430 K17761 - gmx:100808318 917.146