Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1429 ATGGAGAGAATGTTCCCTCCGAAGAAGCCCTCCACTATGAATTCCCACGACCGGCCCATGTGTGTTCAAGCCGACTCTGGCCTCGTCCTCACCACCGACCCCAAGCCTCGCCTTCGCTGGACCGTCGAACTCCATGAACGCTTTGTCGATGCTGTCGCTCAGCTCGGTGGCCCTGACAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGCGTCAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCATTCGATTAAGGATAGCATGAGAGCTTCGGCTTTAGAGCTTCAACGAAACACGGCCTCCCCATCCGCCATGATTGGTCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGAAGACTGCATGAACAGCTCGAGGTCCAGAAACACCTTCAGCTAAGGATTGAAGCTCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCTGCCACTAATAACTTAAAAGGCAATATCAATATTGGAGCAACTCAAGCCATCCCCGAAATAGGAGTCATGAAAGACTTTAGTTCCCCTCTTAGTTTTCCTTTCCAAGAACTCACCATCTATGGCGGCGGCAATGGGGGCGACCAAATTGATCATCATCTTCACCATATGGAGAGGCCACAGCTTGAAGGGTTGATGATGCCAAACAATAATAACAATAACAATAACGAAAATTTGTGTCTAGGGAAAAAGAGGCCGAGTCCTTATAATAGCACTACAACTGGAAAGAGTCCTTTGATTTGGAACGACGATCTTCGGCTTCATCAAGATTTAGGGACAGCTTCATCATGCCTCGGAGGACCTCAAGATGATCCTTTCAAAGGTCTTGACCATCAACTTCACATTGCACCGCCGTCGTTGGATCATAGAGCCGGCGAAATGGATCCCATGTCAGAGATTTACGACACAAAGCCGGTGCTACAAGGAGACGCTGTGTGTGACAAGTTTTCGGATGCTTCAGTGAAGCTTGAAAGGCCGTCACCAAGAAGGACACAGACTACAACCCCTCTTCAAGGAGAAAGGATGAGCCCCATGATTAGCAGTGGTACCATGGCACAAGGTAGAAGCTCTCCATTTGGGTGA 1170 0.4821 MERMFPPKKPSTMNSHDRPMCVQADSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALELQRNTASPSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAATNNLKGNINIGATQAIPEIGVMKDFSSPLSFPFQELTIYGGGNGGDQIDHHLHHMERPQLEGLMMPNNNNNNNNENLCLGKKRPSPYNSTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDHQLHIAPPSLDHRAGEMDPMSEIYDTKPVLQGDAVCDKFSDASVKLERPSPRRTQTTTPLQGERMSPMISSGTMAQGRSSPFG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1429 389 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Prci7g1429 389 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 181 IPR044848 GO:0003700
Prci7g1429 389 Gene3D - 34 92 - -
Prci7g1429 389 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Prci7g1429 389 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Prci7g1429 389 FunFam Myb family transcription factor 34 92 - -
Prci7g1429 389 MobiDBLite consensus disorder prediction 348 389 - -
Prci7g1429 389 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Prci7g1429 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Prci7g1429 389 MobiDBLite consensus disorder prediction 355 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1429 Prci-Chr7 30213012 30215540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1429 4 389 G2-like Transcription Factor Family AT1G79430 55.779 1.02e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci7g1429 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1429 - - pcin:129315830 767.689