Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1423 ATGGGACATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTCTCTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTCATTTCCACTCATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGTACCACATGGTTGCAGAGATGTGGGAAAAGTTGCAGATTAAGATGGATAAACTATTTGAGACCTGACCTCAAAAGAGGTTCTTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATAGGATTCTGGGAAATAGATGGGCTCAGATAGCGAAGCATCTACCTGGGAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGTATTAAGAAGAAACTCATTTCTCAGGGCTTCGATCCGCAAACTCACAATCTTCTCTCTTCTCATAGACGATCCTCTCTTCCTGTTTCTGTTTCTTCTTCCTCTGCCACTAACAGTCATAACAACAATGGTTCCATCTTCAGACTGATTCATGAACCTGAGAATAATATCAATCTTCAACCTTGTAGCTCCAGTGCCGTTTTCTCCATCGAATACCAACAACCTAATAATGTCTCTAACGGTAATAATGTCCTCGAGCCTCATCATAATTTCCCCTTGGAACCATCCGTTATTAATGCAAATATTCCTGCAACCAACTTTTCTTCCTGCATCATCAAGAACAATCATGATTGCTTATCTTCAGTTGTTGGGTTGTCTGAGAATATTATTGAGAACCGATCATCATCAGCATGGGTTTCTCAGGATGATAATGCTGAAACTGATCAGATCTTCAGATCAGCTCATACATTGTTAATGGAAGGAGGAATTGGTACTGAAGCACACTTGGAACAAGAGAAGGACAAGAGAAGTACTACTTCTACTACAAATAATATTAGTATTAATAACAATATTGAGCAAGTCAGAGGGGAAGACGATAATAATAATAATATTAATATTAATATTAATATTAATAATTGTTTGGAGGGGTCAAGTAATAACTTCGACTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCCTCCATGGATGACCTTGCAGCATGGGACTTTTAG 1092 0.3919 MGHRCCSKQKIKRGLWSPEEDDKLVKFISTHGHKSWSSVPKLAGTTWLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRRSSLPVSVSSSSATNSHNNNGSIFRLIHEPENNINLQPCSSSAVFSIEYQQPNNVSNGNNVLEPHHNFPLEPSVINANIPATNFSSCIIKNNHDCLSSVVGLSENIIENRSSSAWVSQDDNAETDQIFRSAHTLLMEGGIGTEAHLEQEKDKRSTTSTTNNISINNNIEQVRGEDDNNNNININININNCLEGSSNNFDFGLLEGVLNSEYMSYDVLSSMDDLAAWDF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1423 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Prci7g1423 363 Gene3D - 71 139 - -
Prci7g1423 363 SUPERFAMILY Homeodomain-like 10 110 IPR009057 -
Prci7g1423 363 ProSiteProfiles Myb-like domain profile. 8 63 IPR001005 -
Prci7g1423 363 CDD SANT 71 111 IPR001005 -
Prci7g1423 363 Gene3D - 10 69 - -
Prci7g1423 363 SMART sant 12 65 IPR001005 -
Prci7g1423 363 SMART sant 68 116 IPR001005 -
Prci7g1423 363 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Prci7g1423 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 63 IPR017930 -
Prci7g1423 363 Pfam Myb-like DNA-binding domain 13 63 IPR001005 -
Prci7g1423 363 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Prci7g1423 363 CDD SANT 16 63 IPR001005 -
Prci7g1423 363 FunFam Transcription factor MYB86 70 146 - -
Prci7g1423 363 FunFam MYB transcription factor 10 69 - -
Prci7g1423 363 PANTHER MYB DOMAIN PROTEIN 55 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1423 Prci-Chr7 30149611 30151843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1423 1 136 MYB Transcription Factor Family AT3G12720 82.353 1.10e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g1423 Myb_DNA-binding 3.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1423 K09422 - gmx:100811532 284.648