Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1422 ATGGGACATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTCTCTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTCATTTCCACTCATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGGTTGCAGAGATGTGGGAAAAGTTGCAGATTAAGATGGATAAACTATTTGAGACCTGACCTCAAAAGAGGTTCTTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATAGGATTCTGGGAAATAGATGGGCTCAGATAGCGAAGCATCTACCTGGGAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGTATTAAGAAGAAACTCATTTCTCAGGGCTTCGATCCGCAAACTCACAATCTTCTCTCTTCTCATAGACGATCCTCTCTTCCTGTTTCTGTTTCTTCTTCCTCTGCCACTAACAGTCATAACAACAATGGTTCCATCTTCAGACTGATTCATGAACCTGAGAATAATATCAATCTTCAACCTTGTAGCTCCAGTGCCGTTTTCTCCATCGAATACCAACAACCTAATAATGTCTCTAACGGTAATAATGTCCTCGAGCCTCATCATAATTTCCCCTTGGAACCATCCGTTATTAATGCAAATATTCCTGCAACCAACTTTTCTTCCTGCATCATCAAGAACAATCATGATTGCTTATCTTCAGTTGTTGGGTTGTCTGAGAATATTATTGAGAACCGATCATCATCAGCATGGGTTTCTCAGGATGATAATGCTGAAACTGATCAGATCTTCAGATCAGCTCATACATTGTTAATGGAAGGAGGAATTGGTACTGAAGCACACTTGGAACAAGAGAAGGACAAGAGAAGTACTACTTCTACTACAAATAATATTAGTATTAATAACAATATTGAGCAAGTCAGAGGGGAAGACGATAATAATAATAATATTAATATTAATATTAATATTAATAATTGTTTGGAGGGGTCAAGTAATAACTTCGACTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCCTCCATGGATGACCTTGCAGCATGGGACTTTTAG 1083 0.3915 MGHRCCSKQKIKRGLWSPEEDDKLVKFISTHGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRRSSLPVSVSSSSATNSHNNNGSIFRLIHEPENNINLQPCSSSAVFSIEYQQPNNVSNGNNVLEPHHNFPLEPSVINANIPATNFSSCIIKNNHDCLSSVVGLSENIIENRSSSAWVSQDDNAETDQIFRSAHTLLMEGGIGTEAHLEQEKDKRSTTSTTNNISINNNIEQVRGEDDNNNNININININNCLEGSSNNFDFGLLEGVLNSEYMSYDVLSSMDDLAAWDF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1422 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Prci7g1422 360 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Prci7g1422 360 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Prci7g1422 360 CDD SANT 68 108 IPR001005 -
Prci7g1422 360 Gene3D - 67 136 - -
Prci7g1422 360 Gene3D - 10 66 - -
Prci7g1422 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci7g1422 360 PANTHER MYB DOMAIN PROTEIN 55 1 306 - -
Prci7g1422 360 FunFam MYB transcription factor 10 66 - -
Prci7g1422 360 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Prci7g1422 360 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Prci7g1422 360 FunFam Transcription factor MYB86 67 143 - -
Prci7g1422 360 CDD SANT 16 60 IPR001005 -
Prci7g1422 360 SMART sant 12 62 IPR001005 -
Prci7g1422 360 SMART sant 65 113 IPR001005 -
Prci7g1422 360 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1422 Prci-Chr7 30149611 30151843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1422 1 133 MYB Transcription Factor Family AT3G12720 84.211 5.99e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g1422 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1422 K09422 - gmx:100811532 290.041