Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1421 ATGGCACCGATGAGTCTCCCACCTGGGTTCAGGTTCCACCCAACAGATGAAGAACTCGTTGCTTACTATTTGGAAAGAAAAATCACAGGCCGTTCTATAGAACTTGAAATTATCCCTGAAGTTGATCTTTACAAATGCGAACCATGGGATTTGCCAGACAAGTCGTTCTTGCCAAGCAAGGATATGGAGTGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAACAGGGCAACGAGGGCTGGATACTGGAAAGCCACAGGGAAAGATAGAGCAGTTCAGTCTCAGAAACGCCAAGTAGGGATGAAGAAGACGTTGGTTTATTACGAAGGAAGAGCACCACATGGGATTAGAACCAACTGGGTCATGCATGAGTATCGCCTCATTGATTCCCTCCCTACTCCTTCTTCCTCCTCCTTGAAGGATTCTTATTCATTATGTCGTGTCTTCATGAAGACGATCCAAATCCCAAAACCAAAAGAAGATCAGGAAGAAGAGGAAACAGAAAATACTGCAAAGAATAAGGCAACTAAGTCTGACATGTGGGTCGCAGAAGAACAAGGATTAAGGGAGGATTCAAGTGGGTTTGAGGTATCTAGAGAAATGGAAATTGCAGATGAGAAAACTATGCTGAATAATAATAATCATGATGGTGAACGTTCTAATGATAATAAGTTTCCTTGCGATAATGCTTCATCTTCGGATCTCACTCAAGGCACTCCTACTCATCAACCTGGTATAGCAGATAATGATATTCAAGCCCAAATTGCTTCTGATGAAGCAAATAGTGCAGCTAATCCGTATTCCCTTGGAATTGACTATTCATCAAGTCTATTTCAGGAAATGGAGCTCCAGATGTATGCTGGAATGCACTATCAACTTCCATATCCATCATTGGAGCTGGAAGATATCCCTCAGACAAATTTTGCAGAGACGAAGCCATTGATGAAACCTGAACAAATGATGATGAATGATTGCATGGTATACGACAAATACAAGAGCTGCAACAGTACAATGAGTGGGACTCTAGAAGAGATCATCTCCTTGTGTTGCTCTCATCAAGACTGTAACTCTTTGCCTCTCCCTATGCTAGACTGA 1113 0.4205 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVQSQKRQVGMKKTLVYYEGRAPHGIRTNWVMHEYRLIDSLPTPSSSSLKDSYSLCRVFMKTIQIPKPKEDQEEEETENTAKNKATKSDMWVAEEQGLREDSSGFEVSREMEIADEKTMLNNNNHDGERSNDNKFPCDNASSSDLTQGTPTHQPGIADNDIQAQIASDEANSAANPYSLGIDYSSSLFQEMELQMYAGMHYQLPYPSLELEDIPQTNFAETKPLMKPEQMMMNDCMVYDKYKSCNSTMSGTLEEIISLCCSHQDCNSLPLPMLD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1421 370 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Prci7g1421 370 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Prci7g1421 370 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Prci7g1421 370 MobiDBLite consensus disorder prediction 162 183 - -
Prci7g1421 370 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Prci7g1421 370 MobiDBLite consensus disorder prediction 162 179 - -
Prci7g1421 370 MobiDBLite consensus disorder prediction 215 252 - -
Prci7g1421 370 MobiDBLite consensus disorder prediction 230 252 - -
Prci7g1421 370 MobiDBLite consensus disorder prediction 215 229 - -
Prci7g1421 370 FunFam Nac domain-containing protein 86 15 160 - -
Prci7g1421 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1421 Prci-Chr7 30140905 30145635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1421 1 353 NAC Transcription Factor Family AT1G54330 51.261 2.61e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1421 NAM 5.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1421 - - gmx:100808325 491.5