Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1393 ATGACTTCGAAGGGCATCACTCTTAATCTTACCCATTTTCAGTTTCTTAAGCGTATTGGGTATGGAGACATTGGAAGTGTATATCTTGTGGAACTTAAAAGGATTAGGACCTACTTTGCCATGAAGGTAATGGATAAAGAATCTCTAGCTAGCAGAAACAAGTTACTAAGAGCACAAATGGAAAGGAAGATTCTTGGACTTCTTGATCACATATTCTTGCCTACTTTATACGCCTACTTCAAAACAGAGAAGTTATACTATTTGTTCATGGAGTTCTACAGTGGTGGTGATCTTCATTCTCTTCGACAAAAGCAACCTAACAAGCATTTTACTGAAGAAGCTGCTAGGTTTTATGCTTTGAAGATTCTGTTAGCTCTAGAGTACCTCCATATGTTAGGCATTGTATATAGAGATTTGAAGCCAGAGAATGTCCTAGTTAGAGATGCAGGCCATATCATGTTGTCAGACTTCGATTTATCACTTCGTTGCTCAGTCAATCTAACACTTGTCAAATCTTCATCTACTCATCATGTGAGTAACAATAATGGTTATGGGGGCATGATAGAGGATGAATATGCAGTGCAGGGTTGTATTCAGCAACCAACTTTCTTCCCGCGAATTCTACCTTCAAAGAAGTCTCGCAAATCAAAATTTGAATTTGGTCCAGTTGGAGGTCCTCTTCCTGAATTGATGGCAGAGCCAACAAATGTAAAATCAATGTCATTTGTTGGGACACATGAATATCTTGCTCCTGAGATTATCCGAGGAGAGGGACATGGCAGTGCAGTGGACTGGTGGACATTTGGGATCTTTTTATATGAACTCTTGCATGGAACAACACCCTTCAAAGGTGCAGGAAATCGTGCTATGCTTTTCAATGTCATATGTCAGCCATTGAGATTTCCAGAAGCTCCTCATGTGAGTTCTGCAGCAAGAGAGCTTATAAAAGGGTTGTTAGTGAAAGAACCTAACAAGAGACTTGCCTATACTAGAGGAGCAACAGAGGTTAAACAACACTCTTTTTTTGAAGGAGTGAACTGGGCTCTAATAAGAAGTGCCTTGCCTCCACATGTACCAAATCTTGTAGATATTACTCAGTATGCTTCCAAAGAAGCACTAGTCCCAAAGGATAAGAGGATGATGGATATCTTAAAAGATCAAAACAAACATGGTGTTTATAACTCGTACATAGATTTTGAGTATTTTTAG 1209 0.3921 MTSKGITLNLTHFQFLKRIGYGDIGSVYLVELKRIRTYFAMKVMDKESLASRNKLLRAQMERKILGLLDHIFLPTLYAYFKTEKLYYLFMEFYSGGDLHSLRQKQPNKHFTEEAARFYALKILLALEYLHMLGIVYRDLKPENVLVRDAGHIMLSDFDLSLRCSVNLTLVKSSSTHHVSNNNGYGGMIEDEYAVQGCIQQPTFFPRILPSKKSRKSKFEFGPVGGPLPELMAEPTNVKSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRAMLFNVICQPLRFPEAPHVSSAARELIKGLLVKEPNKRLAYTRGATEVKQHSFFEGVNWALIRSALPPHVPNLVDITQYASKEALVPKDKRMMDILKDQNKHGVYNSYIDFEYF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1393 402 CDD STKc_phototropin_like 11 364 - -
Prci7g1393 402 PANTHER FLIPPASE KINASE 1-RELATED 8 367 - -
Prci7g1393 402 Gene3D Phosphorylase Kinase; domain 1 11 96 - -
Prci7g1393 402 Pfam Protein kinase domain 13 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1393 402 Pfam Protein kinase domain 238 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1393 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Prci7g1393 402 ProSiteProfiles Protein kinase domain profile. 13 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1393 402 SMART serkin_6 13 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1393 402 FunFam Serine/threonine-protein kinase AGC1-7 235 360 - -
Prci7g1393 402 SUPERFAMILY Protein kinase-like (PK-like) 11 366 IPR011009 -
Prci7g1393 402 Gene3D Transferase(Phosphotransferase) domain 1 97 166 - -
Prci7g1393 402 Gene3D Transferase(Phosphotransferase) domain 1 237 360 - -
Prci7g1393 402 FunFam serine/threonine-protein kinase D6PK-like 97 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1393 Prci-Chr7 29955302 29958302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1393 1 402 AGC Kinase Gene Family AT1G79250 70.142 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci7g1393 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1393 - - rcn:112168243 611.683