Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1376 ATGATGCAAGGAAGTGGACACATAGCAGTGCCTCCGGGGTTCAGATTCCACCCTACTGATGAAGAACTTCTTTACTATTATCTCAGGAAGAAAGTCTCTTTTGAAGCCATTGACCTCGATGTCATCCGAGAAGTTGATCTCAACAAACTTGAGCCTTGGGATCTCAAAGAGAAATGTAGGATTGGATCAGGACCTCAGAACGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCAACCGGAACACGAACGAACCGGGCGACGACGGCTGGATTCTGGAAAGCAACGGGGAGGGACAAGGCCATCTACCTGAGCAATTCCAAGAGGATAGGGATGAGGAAAACCCTAGTGTTCTATACTGGCCGTGCTCCTCACGGCCAAAAGACTGACTGGATCATGCATGAGTACCGTCTAGACCAAGACGACGCTGAGCTTCAGGAAGATGGGTGGGTAGTGTGCAGGGTGTTCAAGAAGAAGAACTTTAACAGAGGATTTCAACATGAAATGGAAGATGAGCAGATAATGAGCCACATGGCATCAACAAGTACTGCTTCTAGTAATTGCATGAAGGTACTTGAACCACTGAAACACCACCACCACCTTCATCATCATCATCATCAAGGACTTGTTCTACCTTATGATGATGACCACCATAATAATAATAATAATAGTAACTATAATAACAGTAATTATAGTAGCTGCTTTAATGCCTCAATGCACCTACCACAGCTATTCAGCCCAGAATCTGCAGTACCACCCATTCTTGCAACCTCCTCGTCGTCGTCAACTGCGACGATGAACCCCTTGGACGTCCTTCACTGCTCTCACAACTTACTCAGGCTGGCTTCAACAACTTCTTCTTCTTCTTCTCCTGGGGGACTCATTAGTAGTCTCATGCAACAGCAACAAGGTGATCAGAGACTCAATAGTGGAGACTGGTCATTCTTGGACAAACTCTTAGCTTCACAACAACAGCAACAACACCAGCCAGTGGTTCCTCATGTGGGGGCTTCTCATCCTCCTCCTTCTTCATCCCACAAATTCCCGTTTCATTACCTTGCTGGTGATCAGAGTGACATCTTGAAGTAA 1092 0.4615 MMQGSGHIAVPPGFRFHPTDEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDQDDAELQEDGWVVCRVFKKKNFNRGFQHEMEDEQIMSHMASTSTASSNCMKVLEPLKHHHHLHHHHHQGLVLPYDDDHHNNNNNSNYNNSNYSSCFNASMHLPQLFSPESAVPPILATSSSSSTATMNPLDVLHCSHNLLRLASTTSSSSSPGGLISSLMQQQQGDQRLNSGDWSFLDKLLASQQQQQHQPVVPHVGASHPPPSSSHKFPFHYLAGDQSDILK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1376 363 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Prci7g1376 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 233 - -
Prci7g1376 363 MobiDBLite consensus disorder prediction 284 304 - -
Prci7g1376 363 MobiDBLite consensus disorder prediction 325 351 - -
Prci7g1376 363 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Prci7g1376 363 Gene3D NAC domain 19 163 IPR036093 GO:0003677|GO:0006355
Prci7g1376 363 FunFam NAC domain-containing protein 19 163 - -
Prci7g1376 363 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1376 Prci-Chr7 29904319 29906922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1376 2 323 NAC Transcription Factor Family AT1G79580 55.963 1.34e-111 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1376 NAM 5.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1376 - - pcin:129316064 620.542