Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1355 ATGTCCTCCGCCACCGTCACCGCTGCCGACACCACCGTCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACGTACTGGTGTCACGAATGCGACATGAGCAACCACCTCCTTCCCTCGGACGACGACGACGACGACGACGGTGAACTTGAGTTCGACGACACTTTTGAAGACCCGTTATCTCTGCTCTCCACACTGCCAAATAGTACCTCCAAATCTTGCTCTGATTCTGTGCCCACTATAGTAGTTACCTCTTCCTTGCTATCGCAGCTTGACCCTGGAGGGGTTCTATGTGCGGTTTGCAAGGACACAATTGGGGTTGATGCGGAGGCTAAGCAGCTTCCGTGTAAGCATTTATACCACTCCGATTGTATCACGCCTTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAACAAGAGGAGGATGGGGTTTCTCAGGCAAGGAGGATCAGAAGGCAGTTGAGAACGGCCATGATGAGGTTGTCTGAATTGATGGAGGAGGAGGATGATTTCTATGGGTTGAGGACTACTCTGAGTCACATTGCTAGTAGACGCCGCGTTCTTTCTTCTGCTGTTTCGGATCATAGGGATGATGAGAACCCTTCTGATTCCCTGGCCTCCCCTCGGGTGACGGAACCAGATTCTGTGTCTGCTGGTGGCAGTGAAAATTCGGAGGCTCTTTCGAGCTGA 708 0.5282 MSSATVTAADTTVVPETAEAEMKTYWCHECDMSNHLLPSDDDDDDDGELEFDDTFEDPLSLLSTLPNSTSKSCSDSVPTIVVTSSLLSQLDPGGVLCAVCKDTIGVDAEAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEQEEDGVSQARRIRRQLRTAMMRLSELMEEEDDFYGLRTTLSHIASRRRVLSSAVSDHRDDENPSDSLASPRVTEPDSVSAGGSENSEALSS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1355 235 Coils Coil 153 173 - -
Prci7g1355 235 MobiDBLite consensus disorder prediction 195 235 - -
Prci7g1355 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 154 IPR013083 -
Prci7g1355 235 SMART ring_2 97 137 IPR001841 -
Prci7g1355 235 MobiDBLite consensus disorder prediction 210 235 - -
Prci7g1355 235 SUPERFAMILY RING/U-box 89 142 - -
Prci7g1355 235 MobiDBLite consensus disorder prediction 195 209 - -
Prci7g1355 235 Pfam Ring finger domain 97 138 IPR001841 -
Prci7g1355 235 ProSiteProfiles Zinc finger RING-type profile. 97 138 IPR001841 -
Prci7g1355 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 41 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1355 Prci-Chr7 29760334 29761223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1355 75 180 C3H Transcription Factor Family AT3G60080 43.636 1.12e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1355 K11982 - pcin:129316714 433.721