Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1347 ATGGAGCTTGGTTTGAGCTTGGGAGATCACGCTTCAAAGCCTTCTGAAACTTCCGGCCTTCTGGGATTAGGCTTCACCACTTTATCCATGGGCCCTATCTGTACAAGAGCATCAAATCGACAGCACGAAGAACCAGAAGAGAAAGAAGCTAAAAAGCAAAAGGGAAAACAGAGTGTCGAAGACCACGAAGATAGACCTGAATATGTTCAGCTTGATCTTCTTCCTCACACTCCAGTCGCTGTTTCTCGCACTAACCCACCTTCCCAAATCTCATTTCCATGGCCTCCTTCTGAAAATGGAAGTTCTTCAAGAGGCGTGGATATGAATAGTTTGCCTCCGCCGCTGGCGGCGGCGGCAGCGGCGGAGGAAGATGAGGCAGCGATGTCGTCGTCTCCGAACAGCGCTGCATCGTCGTTTCAGATGGATCTCGGTGTGTTTAACAGAGGAGGGAGTAGTATTAGCGGTTGCAAGAGGGATTATGATGGAGAGGTATATTATCAAAGGGCTGCTTCTTCAAGAGCAAGCGATGAAGACGACAACGTTGGTAGTACGAGGAAGAAGCTAAGGCTGTCCAAGGAACAATCTGCTTTTCTCGAAGAGAGCTTCAAAGAGCACAGCACCCTCAACCCAAAACAGAAACTTGCTCTTGCAAAACAGCTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAGACAGAGGTAGACTGTGAGTACTTGAAGAGGTGTTGTGAGACACTAACTGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTGAGAGCTTTGAAGGCTAATTCAAACCCATTCTTCATGCAGTTACCAGCCACTACCTTGACCATGTGTCCCTCTTGTGAGCGAGTCGCCACCAACAATTCCTCCGCCGTCGCCGCCACGGTTGTTACTTCCTCTGCAACTCCCTCTACCACCAAAGTCACCGAAACAAGGGCCGCCATTGAACCTGCGTCATCCAAAGCCATTGGATTCCCTCTAAGCAAACCCAAGTTCTATCCTTTTGCTCATACCAAAACCCACCATCCTCATCCATCCTCACCCTCTTGA 1095 0.4895 MELGLSLGDHASKPSETSGLLGLGFTTLSMGPICTRASNRQHEEPEEKEAKKQKGKQSVEDHEDRPEYVQLDLLPHTPVAVSRTNPPSQISFPWPPSENGSSSRGVDMNSLPPPLAAAAAAEEDEAAMSSSPNSAASSFQMDLGVFNRGGSSISGCKRDYDGEVYYQRAASSRASDEDDNVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKANSNPFFMQLPATTLTMCPSCERVATNNSSAVAATVVTSSATPSTTKVTETRAAIEPASSKAIGFPLSKPKFYPFAHTKTHHPHPSSPS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1347 364 CDD bZIP 232 273 - -
Prci7g1347 364 SMART HOX_1 183 245 IPR001356 GO:0003677
Prci7g1347 364 Pfam Homeobox associated leucine zipper 241 275 IPR003106 GO:0006355|GO:0043565
Prci7g1347 364 Pfam Homeodomain 185 239 IPR001356 GO:0003677
Prci7g1347 364 FunFam Homeobox-leucine zipper protein 18 170 246 - -
Prci7g1347 364 ProSiteProfiles 'Homeobox' domain profile. 181 241 IPR001356 GO:0003677
Prci7g1347 364 Pfam HD-ZIP protein N terminus 97 139 IPR006712 GO:0005634
Prci7g1347 364 CDD homeodomain 185 242 IPR001356 GO:0003677
Prci7g1347 364 SMART halz 241 285 IPR003106 GO:0006355|GO:0043565
Prci7g1347 364 MobiDBLite consensus disorder prediction 39 70 - -
Prci7g1347 364 ProSitePatterns 'Homeobox' domain signature. 216 239 IPR017970 GO:0000981|GO:0006355
Prci7g1347 364 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 65 320 - -
Prci7g1347 364 Gene3D - 189 239 - -
Prci7g1347 364 Coils Coil 254 277 - -
Prci7g1347 364 SUPERFAMILY Homeodomain-like 169 242 IPR009057 -
Prci7g1347 364 MobiDBLite consensus disorder prediction 81 108 - -
Prci7g1347 364 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1347 Prci-Chr7 29704417 29706781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1347 82 318 Homeobox Transcription Factor Family AT3G60390 53.571 5.34e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci7g1347 Homeodomain 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1347 K09338 - qsa:O6P43_029477 367.851