Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1344 ATGGAAAACCACCCCAGAAGCCCAGAGGCTCATCCACACCATCAGAAGTGGGGCACGTTGGAGGAGCTCTTGCTTGCCTCCGCCGTCCAGCGTCATGGCTTTAAGGATTGGGACGCCGTCGCCATGGAGGTCCAGAACCGAACTACCCTCCCCAACCTCCTCGTCACCGCTCACCACTGCCGCCAGAAATTCCTCGATCTCAGACGCCGATTCGCCGCCCAACGCGACGGCGCTGTCTCCGACGCACTCGCCGCCGGGGACGACGTCGATCACGTCCCCTGGCTTGACGAATTGAGGAAGCTTCGTGTCGCTGAACTCCAGGCAGCCGTCCAGCGCTCCGACGTCTCCATTCTGTCGTTGCAGCTGAAGGTGAAGAGGTTGGAGGAAGAGAGAGGGAAGAGCTTGAAGGAGAACGTTGGAGAAGGGGAAGAAAAACCGGATCTGGCCGGCTCCGGCGACTCGAGACCGCAAAACGACAAAAAAGGCGGACCTGAAAAAGCTCCTGTGCCGGCGAGTGCCGAACCGGCAACACGACTCGACGGGGATCATAATATTAAGCAACCGACGAGTGACGAATCCGACCGGGACAACCAGTCCGTTAACGAGTCTAACTCGACGGTTTCCGTCGGGAAAACCGGGGAGGGAGAAGTGAAGCTAGAACCGAACCCGGTCCAGGCCGGTCCGAATGAACCAGATGCGGTCGAGAGGAAAGGCAATCCGCTCGGAGAAGAATCTAATAACGGAAGCTACGACGCGACGGCGAAAGTGCCGACGGGTGATTCACTTCCTCCGAGTGAGGAGAGGAAGGTGGAGGACTCGTCGGAGTTGCGAGACTCGGTGACGCACTCGAGGGATGGTGGTGGCGACGGAGGGACGAGGGAGAGCAGTGAGGTGCAGAGCTCGGCGAGTTTGACGAGGAAAAGAAAGCCGAGGCGGAGGAAGGAGGAGGAGGAGCCGCCGGCGAACGACGAGGTGTCCGCGAAAGTTCAGCCGTTGATCGGGGTGTTGGATTTGATCAAAGGTCACGATCACAGCTCATTGTTCGAGCGCCGTCTTGAGAGCCAGGAATTGGAAAGATACAAGAACATAGTACGACAGCAAATGGATTACGAGACCATAAAGCGGCGACTCCGAAACGGGACTTATTCTCGCTGCACTCAGGCTTTCTTCCGTGATCTCCTCCTCCTCTTCACCAACGCCGCCGCCTTCTTCCCCAAAGACTCCGCCGAGTCACGCACTGCACAGCAGTTGGGCCACCTTGTCTCCGCCGAGGTCATCCACCACATCCCGCCGCCCCGATCTGAACCCCATCCCAGAAACCCAGATTCTCTCCCACCAAACCCATCATCATCAACAAAACCAAACCCTGATTCACTCTTGTCAAAACACACAGCTTCTGCTCCTATATTGGTCTGCCGGAAACGCAGTGCATTTTCAACGAAACCTTCTACTTCCTCCGCCGCCTTTGGCCGAAAAGGTGACTTAACGGCCCATGAGAAGAAGAAGCCAGCTTTGGATACAAAACCACCCCCATTGAAGCCATCTTCTTCTGATACAGATGATGAACCTCCCAAGAAAAAGGAAAAGCCTGTCACCGGAGTAAGGAGCCTGAGAAGAAGCAACAAAAGCATCACTGGCAACTCCAACAAGAAGGCAGCCATGACCAGCAAGCCACCGGAGACGCCAAAACCAGATAAGAGCAAAGCAGATGGTTCCTCAGGAACAGATAAAAAGAGGAGCGCGGCGGCGGATTTCTTGAAAAGGATAAAGCGAAGTGCTCCGGCAGAGCCATTGAGAAGTGGTGGTAATAGCAGCAAAGGTGGGGTAAGTGGTGGAAAAGATCAGAAGAAGATGATCGGTGGTGGTAAAGGAGACAGAGGGAAAGACAAAGCATCCAAGCACGGCGGCGGCAGTAGCAGCTCCGGCGACAAAAAGAATGAGAATGAGAATAGTAGTCAATCAAAGAGGAGTGTAGGAAGGCCTCCAAAGAAGGTGGCAGAAACTAGTAATGTTTCTGGAAAGCGTGGCAGGGAAAGTGGTGGAAGGGATAAGAGGCCCAAGAAGCGATCTAAGAAGTAA 2079 0.5507 MENHPRSPEAHPHHQKWGTLEELLLASAVQRHGFKDWDAVAMEVQNRTTLPNLLVTAHHCRQKFLDLRRRFAAQRDGAVSDALAAGDDVDHVPWLDELRKLRVAELQAAVQRSDVSILSLQLKVKRLEEERGKSLKENVGEGEEKPDLAGSGDSRPQNDKKGGPEKAPVPASAEPATRLDGDHNIKQPTSDESDRDNQSVNESNSTVSVGKTGEGEVKLEPNPVQAGPNEPDAVERKGNPLGEESNNGSYDATAKVPTGDSLPPSEERKVEDSSELRDSVTHSRDGGGDGGTRESSEVQSSASLTRKRKPRRRKEEEEPPANDEVSAKVQPLIGVLDLIKGHDHSSLFERRLESQELERYKNIVRQQMDYETIKRRLRNGTYSRCTQAFFRDLLLLFTNAAAFFPKDSAESRTAQQLGHLVSAEVIHHIPPPRSEPHPRNPDSLPPNPSSSTKPNPDSLLSKHTASAPILVCRKRSAFSTKPSTSSAAFGRKGDLTAHEKKKPALDTKPPPLKPSSSDTDDEPPKKKEKPVTGVRSLRRSNKSITGNSNKKAAMTSKPPETPKPDKSKADGSSGTDKKRSAAADFLKRIKRSAPAEPLRSGGNSSKGGVSGGKDQKKMIGGGKGDRGKDKASKHGGGSSSSGDKKNENENSSQSKRSVGRPPKKVAETSNVSGKRGRESGGRDKRPKKRSKK 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1344 692 Coils Coil 117 137 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 536 555 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 618 633 - -
Prci7g1344 692 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 7 692 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 262 291 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 436 452 - -
Prci7g1344 692 Gene3D - 293 429 IPR036427 GO:0005515
Prci7g1344 692 ProSiteProfiles SANT domain profile. 12 48 IPR017884 -
Prci7g1344 692 MobiDBLite consensus disorder prediction 561 594 - -
Prci7g1344 692 Pfam Bromodomain 335 415 IPR001487 GO:0005515
Prci7g1344 692 SUPERFAMILY Bromodomain 319 421 IPR036427 GO:0005515
Prci7g1344 692 MobiDBLite consensus disorder prediction 480 692 - -
Prci7g1344 692 ProSiteProfiles Bromodomain profile. 340 411 IPR001487 GO:0005515
Prci7g1344 692 MobiDBLite consensus disorder prediction 428 461 - -
Prci7g1344 692 Gene3D - 9 66 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 179 198 - -
Prci7g1344 692 SMART bromo_6 110 430 IPR001487 GO:0005515
Prci7g1344 692 CDD Bromodomain 335 417 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 133 150 - -
Prci7g1344 692 SUPERFAMILY Homeodomain-like 13 49 IPR009057 -
Prci7g1344 692 CDD SANT 16 48 IPR001005 -
Prci7g1344 692 MobiDBLite consensus disorder prediction 493 507 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 634 658 - -
Prci7g1344 692 MobiDBLite consensus disorder prediction 133 328 - -
Prci7g1344 692 Pfam Myb-like DNA-binding domain 15 67 IPR001005 -
Prci7g1344 692 MobiDBLite consensus disorder prediction 518 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1344 Prci-Chr7 29651797 29657905 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci7g1344 Bromodomain 6.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1344 - - pcin:129316279 1271.53