Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1330 ATGGCTCCCAAGCAGAGAACACCAAAGGTGAGCAGAAATCCTGAATTGATTAGAGGGATTGGAAAGTACTCGAGGTCGAAGATGTACCACAAAAGAGGTCTCTGGGCTATCAAGGCCAAAAATGGCGGCGTTTTCCCCCGTCACGATCCCAAGCCAAAGCTTGAAGCTCCGGCGGAGAAGCCACCCAAGTTTTACCCTGCCGACGATGTCAAGAAGCCTTTGGTCAACAAGCACAAGCCGAAGCCTACTAAGCTCAGGGCTAGCATTACTCCCGGTACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTCGTTTTTCTGAAGCAGCTTCCCTCTGGGCTGCTCCTTGTCACTGGTCCATTTAAAATTAATGGAGTTCCTTTGAGACGTGTTTGCCAGTCTTATGTCATTGGCACCTCCACGAAGGTTGACATTTCGGGAGTTAATGTTGAGAAATTTGATGACAAATACTTTGCCAAGAAAGCCGAGAAGAAGAAGAAAAAGGGAGAAGGGGAGTTCTTTGAGGCAGAAAAGGAGGAGAAAAATGTGATCCCCCAGGAGAAAAAGGATGACCAGAAAATTGTGGATTCTGCTTTGTTACAAGCTATTGAGAGCGTTCCAGACTTGAAGGCTTATTTGGGCGCAAGGTTTTCTCTCAAGGCTGGCATGAAGCCTCATGAACTAGTCTTCTAA 702 0.4701 MAPKQRTPKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDPKPKLEAPAEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVCQSYVIGTSTKVDISGVNVEKFDDKYFAKKAEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKIVDSALLQAIESVPDLKAYLGARFSLKAGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1330 233 CDD KOW_RPL6 81 233 IPR041997 -
Prci7g1330 233 FunFam 60S ribosomal protein L6 87 171 - -
Prci7g1330 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Prci7g1330 233 Coils Coil 162 182 - -
Prci7g1330 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Prci7g1330 233 SUPERFAMILY Translation proteins SH3-like domain 87 176 IPR008991 -
Prci7g1330 233 PANTHER 60S RIBOSOMAL PROTEIN L6 3 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Prci7g1330 233 Gene3D - 87 171 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1330 Prci-Chr7 29508053 29510208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1330 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.691 6.24e-127 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1330 K02934 - pvy:116113922 373.244