Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci7g1324 | ATGGCTCAGAGAACTGAAAAGGAAGAGACCGATTTCAAGGTGCCTGAAACCATAATCCCCTGCGTCAACAACTGCGGCTTCACCGGCAACCCGGCCACCAACAACATGTGCCAGAAGTGCTTTAACGCCACCACCTCCGCAGCTTCCTCTTCCTCTTCCTCTTCCACGTCCGCAGCCGCCGGAGTTTCGGCGCCTTCTATATTTGCCGACGACAAGTCTTCTAGATCTACCGCGTCTCGCTCTCCCAAGAGATCCTATCCTTCCGATGACTCTGCTCAAACGCCGGATCGGTTGAAGACAGACAAGGGAACGCCGTCTGAAGCGAAGCGGGTTGTGAATCGGTGCTCCGGCTGCCGGAGGAAGGTCGGGTTGACGGGGTTCCGGTGCCGGTGCGGGGAGCTGTTCTGCGCTGAGCATAGGTACTCCGATCGTCACGATTGCAGCTACGACTACAAAGCCGCTGGACGCGAGGCGATCGCAAGGGAGAATCCGGTGGTCAAGGCAGCGAAGATCGTGAAAGTTTGA | 525 | 0.5733 | MAQRTEKEETDFKVPETIIPCVNNCGFTGNPATNNMCQKCFNATTSAASSSSSSSTSAAAGVSAPSIFADDKSSRSTASRSPKRSYPSDDSAQTPDRLKTDKGTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV | 174 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci7g1324 | 174 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
| Prci7g1324 | 174 | Gene3D | - | 1 | 65 | - | - | |
| Prci7g1324 | 174 | SMART | A20_3 | 18 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci7g1324 | 174 | FunFam | Zinc finger AN1-type containing 6 | 88 | 170 | - | - | |
| Prci7g1324 | 174 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 21 | 58 | - | - | |
| Prci7g1324 | 174 | ProSiteProfiles | Zinc finger AN1-type profile. | 109 | 155 | IPR000058 | GO:0008270 | |
| Prci7g1324 | 174 | MobiDBLite | consensus disorder prediction | 47 | 106 | - | - | |
| Prci7g1324 | 174 | ProSiteProfiles | Zinc finger A20-type profile. | 15 | 49 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci7g1324 | 174 | Pfam | A20-like zinc finger | 19 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci7g1324 | 174 | SUPERFAMILY | AN1-like Zinc finger | 98 | 168 | IPR035896 | - | |
| Prci7g1324 | 174 | Pfam | AN1-like Zinc finger | 115 | 152 | IPR000058 | GO:0008270 | |
| Prci7g1324 | 174 | Gene3D | - | 87 | 160 | IPR035896 | - | |
| Prci7g1324 | 174 | FunFam | Zinc finger A20 and AN1 domain-containing stress-associated protein 1 | 1 | 66 | - | - | |
| Prci7g1324 | 174 | SMART | AN1_Zf_4 | 115 | 152 | IPR000058 | GO:0008270 | |
| Prci7g1324 | 174 | MobiDBLite | consensus disorder prediction | 69 | 93 | - | - | |
| Prci7g1324 | 174 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 19 | 173 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci7g1324 | Prci-Chr7 | 29466058 | 29466959 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci7g1324 | 8 | 174 | C2H2 Transcription Factor Family | AT3G52800 | 40.828 | 1.08e-33 | 115 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci7g1324 | - | - | adu:107463072 | 250.366 |