Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci7g1318 | ATGGATGATAGAGTGCCTCCAAGCCTTTTTGTTAATGATGGTTCATTCATGGAGAGATTCAAGCAACTTCAACAAGAGCAGGAGAAGAAAAATGAAACATTAGAGGATTCTAAACCTATTAAAATTGTGCCAGGCTCTTTGACTCCTAATCTTTCCCTTAGCAAAAAGGCCTCTGCAGACTTGAAGGCTAATACACAGAAAACATTCCAGGCTGTTTCCGGTGGTAAACTTGCATTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCTCCACCTGTTAAGTTAAGTGCAGATGAAGATGAAGAAACGGATAATAGAAATGTTTCAAGTGATGCGACTCCAAAACGACAAAAGGTGGGGCATGAAGATGGCATTGAGCGGTCATCAAGACAATCTGATGATGCACCTCCTTCCCCAAGTGATCCTGCAGTAAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAGTTTTTATTTGACGAGAAATGTGATGACTACAAATATTATGAATATCTACTAGCCCAGGAGGAAAAGGCTCTATTGCATACCCGGGAATCACAGACATCACGTAATGGGGGTACAAGCTCCTCATCTTCTAGACCAACCAATGTTCCTCGGAGATCATCTCAGCAGCATTCAACTTACCAAATTCCAGCATCTGCTTTGTATGAAAGTTCTGAAGATCCTGGAGTTTATGGATCTTCAGGTCAAGCAGTGTCAGTTGGAAGTGCTGATGAAACTAGTGGATCATCAAATGCTGATTCTTTAGCATTAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAAAAGACCTAAGCAATCTAAAGATGAGATGCCCCCTCCTGCATCTCTTCAAGCTTCTTCAAAAAAAGGTCATCACATGGGCGATTACATTCCCCAGGATGAACTAGAGAAGTTCTTGGCTACCTGTAATGATGCAGCAGCACAGAAAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGCCACAAGCTTTTGTCAAAAATGGGGTGGAAAGAAGGTGAGGGTCTGGGCAGCTCTAGGAGTGGTATTTCAGATCCCATCATGGCAGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCTAACAACCCTGGCGAGGTGACTCCTGAAGATGACATATACGAGCAGTACAAAAAGAGGATGATGCTCGGTTATCGTCACAGACCCAATCCTCTGAACAATCCCCGCAAGGCTTATTACTGA | 1314 | 0.4285 | MDDRVPPSLFVNDGSFMERFKQLQQEQEKKNETLEDSKPIKIVPGSLTPNLSLSKKASADLKANTQKTFQAVSGGKLAFSLKQKSKLVPPPVKLSADEDEETDNRNVSSDATPKRQKVGHEDGIERSSRQSDDAPPSPSDPAVKKVAEKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCDDYKYYEYLLAQEEKALLHTRESQTSRNGGTSSSSSRPTNVPRRSSQQHSTYQIPASALYESSEDPGVYGSSGQAVSVGSADETSGSSNADSLALMEFYMKKAAQEEKMKRPKQSKDEMPPPASLQASSKKGHHMGDYIPQDELEKFLATCNDAAAQKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRSGISDPIMAGNVKMNNLGVGANNPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 287 | 316 | - | - | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 93 | 129 | - | - | |
Prci7g1318 | 437 | Coils | Coil | 17 | 37 | - | - | |
Prci7g1318 | 437 | SMART | G-patch_5 | 352 | 399 | IPR000467 | GO:0003676 | |
Prci7g1318 | 437 | Pfam | G-patch domain | 355 | 398 | IPR000467 | GO:0003676 | |
Prci7g1318 | 437 | ProSiteProfiles | SURP motif repeat profile. | 146 | 189 | IPR000061 | GO:0003723|GO:0006396 | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 250 | 272 | - | - | |
Prci7g1318 | 437 | SMART | surpneu2 | 144 | 198 | IPR000061 | GO:0003723|GO:0006396 | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 205 | 241 | - | - | |
Prci7g1318 | 437 | ProSiteProfiles | G-patch domain profile. | 354 | 401 | IPR000467 | GO:0003676 | |
Prci7g1318 | 437 | PANTHER | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 | 6 | 437 | IPR040169 | - | |
Prci7g1318 | 437 | Gene3D | Surp module | 127 | 200 | IPR035967 | GO:0003723|GO:0006396 | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 23 | 37 | - | - | |
Prci7g1318 | 437 | Pfam | Surp module | 146 | 195 | IPR000061 | GO:0003723|GO:0006396 | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 202 | 272 | - | - | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 80 | 148 | - | - | |
Prci7g1318 | 437 | SUPERFAMILY | Surp module (SWAP domain) | 132 | 198 | IPR035967 | GO:0003723|GO:0006396 | |
Prci7g1318 | 437 | MobiDBLite | consensus disorder prediction | 23 | 51 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci7g1318 | Prci-Chr7 | 29409616 | 29414473 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci7g1318 | 343 | 437 | C2H2 Transcription Factor Family | AT5G26610 | 32.727 | 1.97e-08 | 53.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci7g1318 | K13096 | - | gmx:100786213 | 596.66 |