Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1318 ATGGATGATAGAGTGCCTCCAAGCCTTTTTGTTAATGATGGTTCATTCATGGAGAGATTCAAGCAACTTCAACAAGAGCAGGAGAAGAAAAATGAAACATTAGAGGATTCTAAACCTATTAAAATTGTGCCAGGCTCTTTGACTCCTAATCTTTCCCTTAGCAAAAAGGCCTCTGCAGACTTGAAGGCTAATACACAGAAAACATTCCAGGCTGTTTCCGGTGGTAAACTTGCATTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCTCCACCTGTTAAGTTAAGTGCAGATGAAGATGAAGAAACGGATAATAGAAATGTTTCAAGTGATGCGACTCCAAAACGACAAAAGGTGGGGCATGAAGATGGCATTGAGCGGTCATCAAGACAATCTGATGATGCACCTCCTTCCCCAAGTGATCCTGCAGTAAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAGTTTTTATTTGACGAGAAATGTGATGACTACAAATATTATGAATATCTACTAGCCCAGGAGGAAAAGGCTCTATTGCATACCCGGGAATCACAGACATCACGTAATGGGGGTACAAGCTCCTCATCTTCTAGACCAACCAATGTTCCTCGGAGATCATCTCAGCAGCATTCAACTTACCAAATTCCAGCATCTGCTTTGTATGAAAGTTCTGAAGATCCTGGAGTTTATGGATCTTCAGGTCAAGCAGTGTCAGTTGGAAGTGCTGATGAAACTAGTGGATCATCAAATGCTGATTCTTTAGCATTAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAAAAGACCTAAGCAATCTAAAGATGAGATGCCCCCTCCTGCATCTCTTCAAGCTTCTTCAAAAAAAGGTCATCACATGGGCGATTACATTCCCCAGGATGAACTAGAGAAGTTCTTGGCTACCTGTAATGATGCAGCAGCACAGAAAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGCCACAAGCTTTTGTCAAAAATGGGGTGGAAAGAAGGTGAGGGTCTGGGCAGCTCTAGGAGTGGTATTTCAGATCCCATCATGGCAGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCTAACAACCCTGGCGAGGTGACTCCTGAAGATGACATATACGAGCAGTACAAAAAGAGGATGATGCTCGGTTATCGTCACAGACCCAATCCTCTGAACAATCCCCGCAAGGCTTATTACTGA 1314 0.4285 MDDRVPPSLFVNDGSFMERFKQLQQEQEKKNETLEDSKPIKIVPGSLTPNLSLSKKASADLKANTQKTFQAVSGGKLAFSLKQKSKLVPPPVKLSADEDEETDNRNVSSDATPKRQKVGHEDGIERSSRQSDDAPPSPSDPAVKKVAEKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCDDYKYYEYLLAQEEKALLHTRESQTSRNGGTSSSSSRPTNVPRRSSQQHSTYQIPASALYESSEDPGVYGSSGQAVSVGSADETSGSSNADSLALMEFYMKKAAQEEKMKRPKQSKDEMPPPASLQASSKKGHHMGDYIPQDELEKFLATCNDAAAQKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRSGISDPIMAGNVKMNNLGVGANNPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1318 437 MobiDBLite consensus disorder prediction 287 316 - -
Prci7g1318 437 MobiDBLite consensus disorder prediction 93 129 - -
Prci7g1318 437 Coils Coil 17 37 - -
Prci7g1318 437 SMART G-patch_5 352 399 IPR000467 GO:0003676
Prci7g1318 437 Pfam G-patch domain 355 398 IPR000467 GO:0003676
Prci7g1318 437 ProSiteProfiles SURP motif repeat profile. 146 189 IPR000061 GO:0003723|GO:0006396
Prci7g1318 437 MobiDBLite consensus disorder prediction 250 272 - -
Prci7g1318 437 SMART surpneu2 144 198 IPR000061 GO:0003723|GO:0006396
Prci7g1318 437 MobiDBLite consensus disorder prediction 205 241 - -
Prci7g1318 437 ProSiteProfiles G-patch domain profile. 354 401 IPR000467 GO:0003676
Prci7g1318 437 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 6 437 IPR040169 -
Prci7g1318 437 Gene3D Surp module 127 200 IPR035967 GO:0003723|GO:0006396
Prci7g1318 437 MobiDBLite consensus disorder prediction 23 37 - -
Prci7g1318 437 Pfam Surp module 146 195 IPR000061 GO:0003723|GO:0006396
Prci7g1318 437 MobiDBLite consensus disorder prediction 202 272 - -
Prci7g1318 437 MobiDBLite consensus disorder prediction 80 148 - -
Prci7g1318 437 SUPERFAMILY Surp module (SWAP domain) 132 198 IPR035967 GO:0003723|GO:0006396
Prci7g1318 437 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1318 Prci-Chr7 29409616 29414473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1318 343 437 C2H2 Transcription Factor Family AT5G26610 32.727 1.97e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1318 K13096 - gmx:100786213 596.66