Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1316 ATGAGTGTGGTGTATAGTCCTGCTCTCAAGTACCCAGGAATGGATCCTAGAAACATCAAACAACAACAACAACAACGTTGTCTGCAGCAGCAGCAAATTTCTGGCCTATTAAGGTACCGGCGTTCTGCTCCGAGCTCATCGCCGGAAAACCTGGTGGAAAGTGAAGGAGGTTGCGCAGATTTGGATCATCAACAACATGAGCGAAGAAGTTATGTTCCATCCTTTGATGCAGAAATGGAAGGCATGTTGGATTCTGGTTCCAACAGTGGATGGAGCAATGTGAAGAATGAAGGAGGAGGACGGGGAGGGTCTGTTTTCTGTAATGAAGATGATCAACCAATTTACCATTCTCATGAAAGATTCCAAGAATTTGCAGGAAGTGGATCATGTTCAAGTGTGATGATGATGAACACTGTGATGGGTTTTCAGAACTCCACTCAATCCAAAATGGCTTCACGGAATTGTTCCAATAATCTTCTCCTCAGGCACAAGAGCTCACCTCCCGGGTTTTTCTCCAATTTCTCTCTCACAAATGGTTTTGCGTCACTGGTTGAACAAGCTACAACATCCACTAATGGCTTGAATGCTGCCTTTACCTTCTCATCTGAGCCATCTTCCTCTTGCCCAAGAAGGATGCCTCAGATCTCTGAAAATGGAAATGAAGCCCTACAACACCAACAAGACCAAGAAGACGAAGCAGCAGCAGCAGCAGCAAGAACCTGTGTTGAAACTAGAGGCCTGCAGAGAAATGACAATGGAGGGCACCACAAAGATTATATCAATATGCCCAGTTTCACAAGTGACTTCTGGGACAGTTCTTCATTCACGGCTAAAAAAACACCCAGTGACAGCAATGAATTCATATTTTCTACTTCAGGTGCTTTGGAATCTCAGCAAGCAGAGCAATTTAGATATCAAAATGTTGGGCTGACTCATCAAATGAGTTTGCCTAGTTCTTCAGACCGGAAGGGCGGCATAGAGAGGATTTTGCATATTCAAGAATCTGTTCCCTGTAAAATTAGAGCCAAAAGAGGCTTTGCTACTCACCCAAGAAGCATTGCTGAGCGGGTGAGAAGAACAAGGATCAGTGAAAGAATAAAGAAGCTGCAAGAGCTTTTCCCAAAATCAGACAAGCAAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGATTATATTAAAGACCTGCAAAATCAAGTTAAGATACTAACAGATACAAGGGCAAAGTGCAGATGCTCGAGTGTTCAAAAGCAACACTGA 1260 0.4357 MSVVYSPALKYPGMDPRNIKQQQQQRCLQQQQISGLLRYRRSAPSSSPENLVESEGGCADLDHQQHERRSYVPSFDAEMEGMLDSGSNSGWSNVKNEGGGRGGSVFCNEDDQPIYHSHERFQEFAGSGSCSSVMMMNTVMGFQNSTQSKMASRNCSNNLLLRHKSSPPGFFSNFSLTNGFASLVEQATTSTNGLNAAFTFSSEPSSSCPRRMPQISENGNEALQHQQDQEDEAAAAAARTCVETRGLQRNDNGGHHKDYINMPSFTSDFWDSSSFTAKKTPSDSNEFIFSTSGALESQQAEQFRYQNVGLTHQMSLPSSSDRKGGIERILHIQESVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQELFPKSDKQTSTADMLDLAVDYIKDLQNQVKILTDTRAKCRCSSVQKQH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1316 419 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 412 - -
Prci7g1316 419 SMART finulus 352 402 IPR011598 GO:0046983
Prci7g1316 419 MobiDBLite consensus disorder prediction 1 22 - -
Prci7g1316 419 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 349 412 IPR036638 GO:0046983
Prci7g1316 419 FunFam Transcription factor bHLH130 family 347 417 - -
Prci7g1316 419 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 396 IPR011598 GO:0046983
Prci7g1316 419 Pfam Helix-loop-helix DNA-binding domain 352 397 IPR011598 GO:0046983
Prci7g1316 419 Gene3D - 348 418 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1316 Prci-Chr7 29396819 29400215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1316 158 415 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 41.379 1.16e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g1316 HLH 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1316 - - pcin:129314949 793.882