Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1296 ATGAATGATGGTAGACCAATGGAGTTGCATTACATAGACCCTTGTTTTCCATATACTCCTAGTGAAAGCTTCATGGAGTTCTTCGACGGCCCGCCAGCGGATTATGATCACGCTGGATCAATTCCTTATCAGGAATACTGGTCCATGAACATGAATCCTTACAAGTTTGGCTTGTCTGGTCCGGATAGTGCATCTTATTATGGATTTTACGAAGAAAATAATAGTTTACCAAGACGGGAGTTCGATAGGGGAGAGTGGGAATATCCTTTAACAACGACCACTGAGGAACTCACCACAACAGACTCTCCATCCGGAAGGGATGGAGTGAATGGAATGCAGACCATCCCTGAAGAATCCAGCCCAAATCGTCATGATTCCAATAGTGCTGAGGTTATATGGCAAGACAATATCGATCCAGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCCGTGGGAACTCAAAGCCGAGGCCTTTCTCAAGAACTCATTGATTTGCTCCCGACCTCAAAGTACAAATTTGGAAGCTTGTTTAAAAGAAAAAATTTTGGGAAAAGGTGCGTAATTTGTCAGATGTCGTATAGAAGAGGTGACCGACAAATAAAATTACCATGCGGGCATGTTTACCATGGTGAATGCATCACTAAATGGCTTAGCATTAACAAGAAATGCCCAGTTTGCAATGTTGAGGTATTTGGTGAGGAATCGACGCACTAG 723 0.4288 MNDGRPMELHYIDPCFPYTPSESFMEFFDGPPADYDHAGSIPYQEYWSMNMNPYKFGLSGPDSASYYGFYEENNSLPRREFDRGEWEYPLTTTTEELTTTDSPSGRDGVNGMQTIPEESSPNRHDSNSAEVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDLLPTSKYKFGSLFKRKNFGKRCVICQMSYRRGDRQIKLPCGHVYHGECITKWLSINKKCPVCNVEVFGEESTH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1296 240 SUPERFAMILY RING/U-box 188 234 - -
Prci7g1296 240 Pfam Ring finger domain 188 230 IPR001841 -
Prci7g1296 240 ProSiteProfiles Zinc finger RING-type profile. 189 230 IPR001841 -
Prci7g1296 240 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 236 IPR033276 GO:0004842|GO:0016567|GO:0046621
Prci7g1296 240 SMART ring_2 189 229 IPR001841 -
Prci7g1296 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 234 IPR013083 -
Prci7g1296 240 FunFam E3 ubiquitin ligase BIG BROTHER 151 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1296 Prci-Chr7 29274506 29278909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1296 3 240 C3H Transcription Factor Family AT3G63530 54.694 6.28e-93 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1296 K19045 - gmx:100785290 384.415