Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1295 ATGATAATGGGGAGGGACAAGAACAGTAGTAGTAAGAACAATAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAGGATGAGAAGCTGATGAGGTACATGTTGACCAATGGACAAGGTTGTTGGAGTGATATTGCCAGAAATGCAGGACTTCAGAGGTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTCAAGAGGGGCGCTTTCTCTCTCCAAGAAGAACAGCTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGACAATGAAATTAAGAACTTCTGGAACTCTACTTTAAAGAAAAGGATGAAAAACAGCAACGATAATACTGCTACTACTACTTCCACTGCTACTCCTTCACCAAACAACAGCACAGACTCATCATCAAATCATATTGTTCTCAATGGGATCACCACCACAGCCTCCATGCCCTTCATCAATAAGCAAGATCTCATCAACATGACCTTGTGCATGGACTCATCACCTTCATCAATATCATCATCTTCATCGGCGTCCGTACAATCCATGCAGGCCATGGCCTTCGGTGGTGATCACAGGTTGATGGAGTATCCCTTTTCCATGTTGGATAATAACAGTAATATTCCTTATGACATGCCTGCATGCTTAACACAAGTTGGTTGTGGTAGTGGCGGCATGGTCGAAGATGGGATTTATGGGGATGATTATAATAATGGGTTGGTATTTGAGGGAGAGGATAATAAAGTAATGGGGTTAGAAAGAGACCTGTGTCTTCCTTCTCTAGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTAGTGCTGTTCCTATTGATGTGAAAGGTCATATCAACAACAACAACAACAACCATTTTAATAATGGTTGCTTCAATAACACTGATCATCAGTACCACCACCACCATCATCAGGACTTGGTTGGGTTTGGAAATAATAATCATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTAATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1098 0.4226 MIMGRDKNSSSKNNNNVVKLRKGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNSNDNTATTTSTATPSPNNSTDSSSNHIVLNGITTTASMPFINKQDLINMTLCMDSSPSSISSSSSASVQSMQAMAFGGDHRLMEYPFSMLDNNSNIPYDMPACLTQVGCGSGGMVEDGIYGDDYNNGLVFEGEDNKVMGLERDLCLPSLESRSMEEKYNSSAVPIDVKGHINNNNNNHFNNGCFNNTDHQYHHHHHQDLVGFGNNNHGQSGENLRMGEWDLEGLMQDISSFPFLDFQVE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1295 365 CDD SANT 77 120 IPR001005 -
Prci7g1295 365 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Prci7g1295 365 Gene3D - 76 149 - -
Prci7g1295 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 69 IPR017930 -
Prci7g1295 365 CDD SANT 25 69 IPR001005 -
Prci7g1295 365 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Prci7g1295 365 SMART sant 21 71 IPR001005 -
Prci7g1295 365 SMART sant 74 122 IPR001005 -
Prci7g1295 365 PANTHER MYB DOMAIN PROTEIN 55 11 313 - -
Prci7g1295 365 MobiDBLite consensus disorder prediction 123 151 - -
Prci7g1295 365 FunFam MYB transcription factor 19 75 - -
Prci7g1295 365 Gene3D - 19 75 - -
Prci7g1295 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Prci7g1295 365 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Prci7g1295 365 Pfam Myb-like DNA-binding domain 25 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1295 Prci-Chr7 29259693 29263402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1295 5 365 MYB Transcription Factor Family AT3G08500 43.902 2.38e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g1295 Myb_DNA-bind_6 4.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1295 K09422 - zju:107417581 350.132