Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1280 ATGGAAGCCATTGCTGATAGAGTCATTGGGCTATTGGGCTCTTTGGCTTTTAAAGAGCTTGATATTCTTTGCAACTTCCAAGATGATTTAGAGAGCATGAACAGCATGGTCTCTGCAATCAAAGCAGTACTTCGTGATGCTGAGGCAAAGGACATGAAGGATAATCTGATCAATGACTGGCTAGTGAAGCTCAAAGATGTGCTACTTGATGCAGAAGACTTGTTGGATGCTTACTCCGCAGATGAGCTTGCTAGGGAAGTGATGACTAAAGGCAAAAGAGCCAAAGGGGTACGTATATTCTTCTCTAAATCCAATCGAATTGTTTGTGCTGCTAAAATAGGTCATGAGATTCGGGCAATCAGGAAGAAACTTGATGGCATTTTCAATGAGAAAAACAATCTGCATTTGAGTAAAATCTCATCCACTGCTTCCATTGAGTCTCATGACTGTAGGGAAACCTACTCGTTTGTGAGGGAGGAAGATGTTGTAGGAAGAGACGAGGAAAGGAAGCATCTTGTTAGTACCCTTTTAGACCTTGATGTGAAAACTAATGTTTCTGTGGTACCCATAGTTGGGATTGGAGGATTGGGGAAGACTACACTTGCTCAACAAGTGTATAATGATGAGGCTATCAAAAAGCATTTTGAGCTAATGAAGTGGGTTTGCGTGTCTGATGAATCCTCTGAATTTAACAATAAGAAGGTAGCTCAAAACATAATTGGACATGAAATAGGTGGTGACGTGGAGAAAGTCACAGAGGCTTTAAGAGACAAGATTGAGGGGAAACTTTTTCTGCTTGTGTTAGATGACTTCTGGAATGAGGATCGTGAGAAATGGCTTAAATTAGAAAGCCTGTTAAGGGGAGGAAAAAAGGGAAGCATGATTATTGTGACCACGCGTAGTAAAATAGTAGCACAAATAATGGGCACATTTGTACCTCTTTACTTAGATGATTTGGATTTTAAAAACTCTTGGGAGCTATTTCATAGAATGGCTTTTAAGGATGGGAAAGAACCAGATAATCAAGAGTTGGTAGGTATTGGAAGGGACATTGTGAGAAAATGTGCAGGAGTTCCCCTTGCCATAAGAACTATTGGTAGCCTCTTGTTCACTAAAAAGATGGGAGTGAGTGAATGGTCATATTTTAGGGATAATGATCTTGCAAGTATAGATTCTGATGACAAGAATAAAATCTATTCTATCCTTAAACTTAGTTATGATCATCTTCCCTCCCATTTGAAAAATTGCTTTGCATTTTGCTCTCTGTTTCCTAAAGATTATGTGATTGAGAGAACAACACTTGTTCAACTATGGATGGCTGAGGGGTTCATTCAACCCTTGGATAAACATAGATGCATGGAAGATGTTGGTGACGAGTACTTCAAGAGTTATTGTCAAGGTGCTTGTTTCAAGATGTGA 1419 0.3953 MEAIADRVIGLLGSLAFKELDILCNFQDDLESMNSMVSAIKAVLRDAEAKDMKDNLINDWLVKLKDVLLDAEDLLDAYSADELAREVMTKGKRAKGVRIFFSKSNRIVCAAKIGHEIRAIRKKLDGIFNEKNNLHLSKISSTASIESHDCRETYSFVREEDVVGRDEERKHLVSTLLDLDVKTNVSVVPIVGIGGLGKTTLAQQVYNDEAIKKHFELMKWVCVSDESSEFNNKKVAQNIIGHEIGGDVEKVTEALRDKIEGKLFLLVLDDFWNEDREKWLKLESLLRGGKKGSMIIVTTRSKIVAQIMGTFVPLYLDDLDFKNSWELFHRMAFKDGKEPDNQELVGIGRDIVRKCAGVPLAIRTIGSLLFTKKMGVSEWSYFRDNDLASIDSDDKNKIYSILKLSYDHLPSHLKNCFAFCSLFPKDYVIERTTLVQLWMAEGFIQPLDKHRCMEDVGDEYFKSYCQGACFKM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1280 472 Gene3D - 146 312 IPR027417 -
Prci7g1280 472 PRINTS Disease resistance protein signature 355 369 - -
Prci7g1280 472 PRINTS Disease resistance protein signature 187 202 - -
Prci7g1280 472 PRINTS Disease resistance protein signature 258 272 - -
Prci7g1280 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Prci7g1280 472 Pfam NB-ARC domain 179 407 IPR002182 GO:0043531
Prci7g1280 472 Gene3D - 319 410 IPR042197 -
Prci7g1280 472 Gene3D - 6 118 - -
Prci7g1280 472 PANTHER DISEASE RESISTANCE PROTEIN RP 44 462 IPR044974 GO:0006952
Prci7g1280 472 Pfam Rx N-terminal domain 7 88 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1280 Prci-Chr7 29074800 29077342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1280 168 373 WRKY Transcription Factor Family AT5G45050 28.507 9.92e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1280 - - pcin:129314965 913.294