Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1230 ATGATGGCAATGGGCAAAGAAACTTGGTGGGTTCTTTTCCTTCTATCAACACTGCTGTTGGTGGAAGAAATCCATGGAAGCAGGAAGCAAGAACAAGCCCTCAAGAATCGGAACAAGTCTAAGTTCTTCAGTGGAGGAGCCATTGACAGAAGCAGTAAAACAATCTTCAAGGTAGATGAAGCTGTGTATGTCGATGATGATAAGTCTCGTTACTATTATCCTCAACAAGGATTGAAAGAGAAAGATAGAATTAAAAGACTTCCTGGACAGCCTGAAGATGTGAGTTTCTCTCAATATGGAGGGTATGTTACTGTGGATAAAATTGCAGGACGAGCTTTCTATTATTATTTTGTTGACGCTCAACAATCTCGTCATAAGCATAAATTGCCTCTTCTTCTATGGCTCAATGGAGGTCCAGGATGTTCATCACTAGGGTATGGAGCTATGCAAGAGCTTGGACCATTCAGAGTAAACAGTGATGGCAAAACACTCCACAAAAACAAATACTCATGGAACCATGGTGCAAATGTAGTATTTGTGGAATCACCAGCAGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTATGACAATAATGGAGATAGAAGAACTGCTACAGACAACTATATATTCTTAAGAAACTGGTTAGAGAGGTTTCCTGAGTACAAATCTTCTGATTTCTACATTGCTGGTGAGAGCTATGCCGGTCATTATGTTCCTCAACTTGCTCACACCATTCTTCATCACAATCAGCATCCAAACTCTACCTTCTTCATCAACCTCAAAGGCATCTTGATAGGGAATGCAGTGATAAATGACGAGACAGACAGCAGAGGAAGATGGGATTTCCTGGCGAGCCATGCCATAATATCAGACAAAGCAGCTCATGTTGTTAACAATCTCTGCGATTCCTCAGAGTCAGCTTCTTCCTCAAGCACTGATGAACAAACCAATGCGTGTAGAGCTGCATCTGATGAAATAGAACAAGACGTTAACTCCATCAATATCTACAACATCTATGCTCCTCAATGCCTTGATTCTAATCTCACTTCCCCACCTAAGCCTCCTTCTATAGTGACAGATCCATGCATTGATTATTACGTGTATGCATACCTGAACCGGGTTGACGTGCAAGAAGCTATGCATGCTAACGTGACAAAGTTGACTCATGATTGGGGACTTTGCAGTGATGTTATCAACAAGTGGGGTGATAGCCCTTCCACTGTGCTTCCTCTCTTACAAGAGTTCCTCAATCATAGCCTTCGGGTTTGGATTTTTAGTGGTGACTTTGATGGAATGGTACCGGTTACTTCAACAAAGTATTCCATTGACAAGTTAAATCTCCCTCCTAAGACTGTGTGGCATCCTTGGTTCGTCGATGGAGAGGTAGGAGGGTACACGCAAACATTTAAAGGAGAGTTGACATTTGCAACAGTGAGAGGAGCAGGACATGAAGTGCCAAGCTACCAGCCAGCAAGAGCTCTTTCTTTGATCAATCACTTCTTAAAAGGCATCCCTCTTCCTCATACCACAACTTCAACACAAAACAACCATGCAATGGGAAGAGAAACTAGTTGGTTGGTCCTCTTCCTTCTCTCAACACTACTCTTGGTGGGTGAAATCCATGGAAGCAGAAAGCAAGAACAAGCTCTCAACAATGTTCTAAGCAAGGCCAAGTTCAGAGGAGTTTCCACTGACAATAGCAACAGGACAAACTTCGAGGTAGATAAGGCTATATTTGGTGAGGATGAAAAGGCTCGTTACTTTTATCCTCAAGAAGGATTGAAAGAGAAAGATAGAATCGAGAGACTCCCAGGACAACCTGAAGATGTGAATGTCTCTCAGTATGGAGGTTATGTCACTGTAGATAAGGTTGCAGGACGAGCTTTATATTATTATTTTGTGGAAGCTCAACAATCTGATAGGCACAAACTGCCTCTTCTTCTTTGGCTCAATGGAGGCCCTGGATGTTCCTCTCTAGGGTATGGAGCAATGCAGGAGATTGGGCCCTTTCGAGTGAACAGTGACGGCAAAACGCTTTACACAAACAAATACTCTTGGAGCCTTGCTGCAAATGTTCTATTTTTGGAATCACCAGCAGGAGTGGGATTTTCATATTCAAATAGGACATCAGATTATGATAATAACGGGGACAAAAAAACTGCTTCAGAAAACTACATATTCCTAAGGAATTGGTTGGAGAGATTTCCTGAGTACAATTCCTCTAAGTTTTACATTGCTGGAGAGAGCTATGCAGGCCATTATGTTCCTCAGCTTGCTGACACCATTCTCCACCACAACAACCTCCCTAATTCCTCCTTCTTCATCAACCTCAAAGGCATCTTAATAGGAAATGCAGTGCTAAATGATGAGACAGACAGTAGAGGATTATGGGACTTTCTTGCGAGTCATGCCATAATATCAGACAAAGCTGCCTTAGATGTTCAATTGTGTGATTTCTCAAATGTTGCCACAAATCTTAGCAATGAGTGCCAAGAAACATTGGAAGAAATCGGAACCAACATTGTAGACATTGATTTATACAACATCTATGCTCCTCTATGCCACAATTACAACCTCACTTCCCTTCCTAAGCCACAAAGTGAAATGATAGACCCATGTAATGAAGTGTATGTGACAGCATATTTGAACATGGCTGAGGTACAAGAGGCACTACATGCCAATGTCACAAAACTTACACATGACTGGTCACCATGTTCTGGTCTTATCACCAAATGGCTTGATAGCCCTGACACAGTGCTTCCCCTCTTACATCACTTACTCAATCATGGCGTTCGACTTTGGATCTTTAGTGGGGACGTAGATGGAATAGTTCCGATAACTTCAACCAAGTATTCCATTGAGTTGTTGAATCTCACTGCTATGACTTCTTGGCACCCTTGGTTTGTTGATAGAGAGGTGGGAGGATACACACAAATTTACAAGAAAAACTTCACATTTGCAACAGTGAGAGGAGCAGGGCATCAGGTCCCAAGCTACCAGCCAGCAAGGGCCCTTTCTTTGATCACTCATTTCTTACAAGGCATTCCTCTTCCTACATATAACCACACATTTTGA 3081 0.4216 MMAMGKETWWVLFLLSTLLLVEEIHGSRKQEQALKNRNKSKFFSGGAIDRSSKTIFKVDEAVYVDDDKSRYYYPQQGLKEKDRIKRLPGQPEDVSFSQYGGYVTVDKIAGRAFYYYFVDAQQSRHKHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLHKNKYSWNHGANVVFVESPAGVGFSYSNKTSDYDNNGDRRTATDNYIFLRNWLERFPEYKSSDFYIAGESYAGHYVPQLAHTILHHNQHPNSTFFINLKGILIGNAVINDETDSRGRWDFLASHAIISDKAAHVVNNLCDSSESASSSSTDEQTNACRAASDEIEQDVNSINIYNIYAPQCLDSNLTSPPKPPSIVTDPCIDYYVYAYLNRVDVQEAMHANVTKLTHDWGLCSDVINKWGDSPSTVLPLLQEFLNHSLRVWIFSGDFDGMVPVTSTKYSIDKLNLPPKTVWHPWFVDGEVGGYTQTFKGELTFATVRGAGHEVPSYQPARALSLINHFLKGIPLPHTTTSTQNNHAMGRETSWLVLFLLSTLLLVGEIHGSRKQEQALNNVLSKAKFRGVSTDNSNRTNFEVDKAIFGEDEKARYFYPQEGLKEKDRIERLPGQPEDVNVSQYGGYVTVDKVAGRALYYYFVEAQQSDRHKLPLLLWLNGGPGCSSLGYGAMQEIGPFRVNSDGKTLYTNKYSWSLAANVLFLESPAGVGFSYSNRTSDYDNNGDKKTASENYIFLRNWLERFPEYNSSKFYIAGESYAGHYVPQLADTILHHNNLPNSSFFINLKGILIGNAVLNDETDSRGLWDFLASHAIISDKAALDVQLCDFSNVATNLSNECQETLEEIGTNIVDIDLYNIYAPLCHNYNLTSLPKPQSEMIDPCNEVYVTAYLNMAEVQEALHANVTKLTHDWSPCSGLITKWLDSPDTVLPLLHHLLNHGVRLWIFSGDVDGIVPITSTKYSIELLNLTAMTSWHPWFVDREVGGYTQIYKKNFTFATVRGAGHQVPSYQPARALSLITHFLQGIPLPTYNHTF 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1230 1026 FunFam Carboxypeptidase 362 508 - -
Prci7g1230 1026 SUPERFAMILY alpha/beta-Hydrolases 598 1020 IPR029058 -
Prci7g1230 1026 Pfam Serine carboxypeptidase 88 505 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 Pfam Serine carboxypeptidase 606 1016 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 ProSitePatterns Serine carboxypeptidases, histidine active site. 475 492 IPR033124 GO:0004185
Prci7g1230 1026 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 179 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 488 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 190 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 ProSitePatterns Serine carboxypeptidases, histidine active site. 986 1003 IPR033124 GO:0004185
Prci7g1230 1026 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Prci7g1230 1026 FunFam Carboxypeptidase 78 347 - -
Prci7g1230 1026 Gene3D alpha/beta hydrolase 595 864 IPR029058 -
Prci7g1230 1026 FunFam Carboxypeptidase 410 505 - -
Prci7g1230 1026 FunFam Carboxypeptidase 596 858 - -
Prci7g1230 1026 ProSitePatterns Serine carboxypeptidases, serine active site. 747 754 IPR018202 GO:0004185
Prci7g1230 1026 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 83 492 IPR001563 GO:0004185|GO:0006508
Prci7g1230 1026 Gene3D - 410 505 - -
Prci7g1230 1026 Gene3D - 921 1016 - -
Prci7g1230 1026 FunFam Carboxypeptidase 872 1019 - -
Prci7g1230 1026 Gene3D - 875 911 - -
Prci7g1230 1026 Gene3D - 364 402 - -
Prci7g1230 1026 FunFam Carboxypeptidase 921 1016 - -
Prci7g1230 1026 Gene3D alpha/beta hydrolase 78 346 IPR029058 -
Prci7g1230 1026 SUPERFAMILY alpha/beta-Hydrolases 80 509 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1230 Prci-Chr7 28688410 28702450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1230 372 508 Calmodulin-binding Proteins AT2G22960 30.657 4.37e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1230 - - pcin:129316698 2065.43