Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1197 ATGGGCAAGAAGAAGAGCTGGTTTACTCTGATAAAGAGACTTTTTAGACGGGACACCCAGTCTGAACTAGGCAAGAAGGAAAAGAGAAGGGAATGGGTATATGGTAGGCTGAAGATTAAGAGATTAACTCCAATTGCTGCATCTAAAGAAACAACAATGGCAGGAGGTGAAGAAGATGAAGAACAGAGGAATAATGCTTTATCAGTGAAAGAAAATTCTTCAGCCATCAAAATCCAGGCTACATTTAGGGGTTACCTAGCAAGGAAGGCATTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTAGAGGCAGAGCAGTAAGACGCCAAGCTCTGAGGTCACTCATGTTGCAGTCAATTGTAAGTATCCAATCACAAGTCTCTGCTTCAAGGAGACTTCAAATACTTGAAGGCAGATCTCTCTGTGATAAACCCCAAAGCTTCCAAGCTTCAAGGGATAGGTTAATAAGGGTGGATTTAAACAGTGAAAAAAGGTGGGATGACAGCATTTTGCTTAAGGAAGAGTTAGAGACGTCATGCATGAGCAAGAAAGAAGCTCTTCTCAGGAGAGAGAGAATAAAGCAGTACTCGTTTAACCATCGAATGTCAGCAGAAACAGAAAGGAACAAAGTAAATGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACTCAACTTTCTAAGAGCAAAGAGCTTGAAGATTTAGACATAGCATTTAGCTCTGGTTACAAACGTGAGAAAGATAATGGAGGAAGATCACTTAAACTGAGAAATATTCAGAGGCAAAATCAGAATGAAGTGTTGAACTGTCACAGGAGGCAATGTTCAGTGGGAAGAGAAGATAACTCATTCACAAGCTCTCCTTTGATTCCCACTTACATGGCAGCAACTGAATCAGCAAAAGCCAAAGCAAGATCCATAAGCTCCCCAAGATTAAGGGCATGGAATTTGGAGGCTGATTCTGATTATAGCTATTCACCATGCATGAAAAAGCTATCTCTTGTATCTCCTGGTAACACAACTAGTGAGGTTTTTGGCAGTAATCGGATTGGGAAGTTTAGTGGTAGTAATTACAAGCAAATATCTCCTAAGTTAAAAGGTACAGTTTCAATGATGGACAAGGTTTGA 1137 0.4063 MGKKKSWFTLIKRLFRRDTQSELGKKEKRREWVYGRLKIKRLTPIAGXSKETTMAGGEEDEEQRNNALSVKENSSAIKIQATFRGYLARKALRALKGIVKLQAIIRGRAVRRQALRSLKXLQSIVSIQSQVSASRRLQILEGRSLCDKPQSFQASRDRLIRVDLNSEKRWDDSILLKEELETSCMSKKEALLRRERIKQYSFNHRMSAETERNKVNGRWRYWLEQWVDTQLSKSKELEDLDIAFSSGYKREKDNGGRSLKLRNIQRQNQNEVLNCHRRQCSVGREDNSFTSSPLIPTYMAATESAKAKARSISSPRLRAWNLEADSDYSYSPCMKKLSLVSPGNTTSEVFGSNRIGKFSGSNYKQISPKLKGTVSMMDKV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1197 380 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Prci7g1197 380 ProSiteProfiles IQ motif profile. 96 123 IPR000048 GO:0005515
Prci7g1197 380 Pfam Protein of unknown function (DUF4005) 285 349 IPR025064 -
Prci7g1197 380 Gene3D - 69 124 - -
Prci7g1197 380 SMART iq_5 71 93 IPR000048 GO:0005515
Prci7g1197 380 Pfam IQ calmodulin-binding motif 74 93 IPR000048 GO:0005515
Prci7g1197 380 ProSiteProfiles IQ motif profile. 72 100 IPR000048 GO:0005515
Prci7g1197 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 116 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1197 Prci-Chr7 28369813 28372887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1197 1 372 IQD Protein Family AT5G13460 45.154 2.92e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1197 - - gmx:100800192 397.897