Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1182 ATGGAGTCTGGCTCACCTTATCAGTGGCTGAGAGAGCTGAGATGGGACAATGGAGGCTTTAACCCAATCTCTGTGCTTCTTGATTGTGCAAAATGTGTTGCAACTGGAAGCATTAAGAATGCAGACATGGGTCTTGAGTTCATCTCCCACCTTGCCTCACCTGATGGCGATGCAGTTCAGAGAATGGTCACTTATTTTAGTGAAGCCCTTGCTTACAGAATCATCAAGAACCTTCCAGGTGTCTATAAAACCCTCCATTCCTCAAAACCCTCACCAACCTCAGAACAAGTCTTGGTCCAAAAATACTTCTTTGAGCTGTGTCCTTTCTTGAAACTAGCGTACTTGACCACAAACCAGGCCATTGTTGAAGCCATGGAAGGTGAAAAGCTTGTTCACATCATAGACCTTCATTCTTCTGAACCTGCACAGTGGGTTGACCTTCTGATGACTCTGAAAAAACGTCCAGGTGGCCCTCCTCACTTGAAGATCACAGGTATTCATGAGAAGAAAGAGGTTCTGGATCAAATGGGGTTTCATTTGACCACTGAAGCAGGAAAACTTGACTTCCCTTTACAGTTCAATCCAATTGTGAGCAAGATGGAAGATCTTAACCTTGAAAGCTTGCCTGTCAAGTCTGGAGAAGCACTTGCCATAAGTTCTGTGCTTCAGCTTCACACTCTTCTTGCAAGTGATGATGATGTAGCTGCCAGAAACTCACCAGCCACACCCATGAATCTGCAGAGAGCCGTTCATCATCATCATCATCAGCAGCAGAACCAAAGGACTTTTGCAGAATGGTTAGAGAAGGACATGATCAATGCTTATATCACAAGTCCAGACTCAGCACTGTCACCACTTTCTCTCAGTGCTTCTCCTAAAATGGGAATGTTTTTGAACTCCTTAAGGAAACTCCAACCCAAACTGATGGTGATCACTGAGCAAGAATCAAACCTTAATGGGTCTAACCTAATGGAGAGGATAGAGAAAGCACTGTACTTCTATAGTCCATTGTTTGATTGCTTGGACTCAACTGTTTCGAGGACTTCATTGGAGAGACAGAAACTTGAGAGTGAACTGCTTGGGGAACAGATCAAGAGGATCATAGCCTGTGAGGGTTTTGAGAGGAAGGAAAGGTACGAGAAGCTTGAGAAATGGATTCCAAGGCTGGAAATGATTGGTTTTAAGAGAGTTCCATTGAGCTACTATGGGATGTTGCAGGCAAAGAGATTGTTGCAGAGCTATGGATACAAGTACAAGATTAGAGAAGAGAATGATTGTTTGCTTCTGTGTTGGAGTGATAGGCCACTTTTTGCTGTATCAGCTTGGAGTTATAGAAGATGA 1341 0.437 MESGSPYQWLRELRWDNGGFNPISVLLDCAKCVATGSIKNADMGLEFISHLASPDGDAVQRMVTYFSEALAYRIIKNLPGVYKTLHSSKPSPTSEQVLVQKYFFELCPFLKLAYLTTNQAIVEAMEGEKLVHIIDLHSSEPAQWVDLLMTLKKRPGGPPHLKITGIHEKKEVLDQMGFHLTTEAGKLDFPLQFNPIVSKMEDLNLESLPVKSGEALAISSVLQLHTLLASDDDVAARNSPATPMNLQRAVHHHHHQQQNQRTFAEWLEKDMINAYITSPDSALSPLSLSASPKMGMFLNSLRKLQPKLMVITEQESNLNGSNLMERIEKALYFYSPLFDCLDSTVSRTSLERQKLESELLGEQIKRIIACEGFERKERYEKLEKWIPRLEMIGFKRVPLSYYGMLQAKRLLQSYGYKYKIREENDCLLLCWSDRPLFAVSAWSYRR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1182 446 Pfam GRAS domain family 24 442 IPR005202 -
Prci7g1182 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 439 IPR005202 -
Prci7g1182 446 ProSiteProfiles GRAS family profile. 13 443 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1182 Prci-Chr7 28239367 28248081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1182 1 446 GRAS Transcription Factor Family AT1G50420 52.889 2.66e-165 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g1182 GRAS 3e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1182 - - gmx:106798410 678.322