Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1181 ATGGTAAGTCCTCAATTTGTTTGTGAGAGAATAGGCTTGGAAGGTGAGGAAAGGGGAATATTTCTCATTCGTCGCCTGGCGACCTGTGCTAGGCTTATTGAAAATGGTGAGTTGAAGGATGCAGGCTTTGGACTCAAGGACATGGCCGGTTTTGTTTCTGCTGATGGAGATCCAATGCAGAGGCTGGCTACCTACTTCAAAATGGCTCTTAGTTACAGGTTGATAAAAAGTATTCGCCATGTTCCTCAAGTCCTATGTTTCACTAATCCCTGGTCAACCTTAGAACAACAACATGCCAGGAAGTTGTTCTTTGAATATCTCCCATTCTTGAAGTTTGCTTATTTGATCACCAATCAGGCGATTGTTGAAGCCATGCAAAGAGAATCAAAGTTCCATATCATCGTTCTCAATGCATGGAATGCTGCTCAATGGAGCAATCTTCTTCATACTTTGAAAGAACAACGAAAAGGAACAAATACACTACAGCTTCTCAAGATCACTGGGATTCATGAGAATAAAGAGGTTTTGCAAGAAATGGAATCTCAGTTGATCCAAGAAGCTAAGAATCTGAACATCCCCTTCGAATTCTATTCTATTGCAAGACAATTGGAGGAACTTAGCATCGAAGATTTTCCAGTACACCCAGAAGAGCCCATTGCTATAAGTTCTGTTCTTCATCTTCATTCTCTTCTAGCAGTTGATAATGATCATCATCAAGTCAGTCCTAATGATTCAGACTTGCCGCTTAAACTGAGGAGGTTTTTAAGCGTCCTTTGGAAACTCCACCCCAGGTTGATGATCATCACAGAACAAGAATCAGATAACAATGGGTCTTCTTTAACAGACAGGCTTGACGAGGCACTGAACTTCTATGCTGCGTTATTTGATGGCTTGGAAGCCAATAATGTTCTAAAAGAAAGAGCTATGAAGAGAATTATGCTAGAGAGGATGCTTCTAGGGGAAGAGATAAAGAACATTATTGCATGTGATGGAGCTGATAGAAAAGAGAGGCATGGTAAGTTCTTGAAGACATGGCGTCCATCACTTGAATTAGCTGAATTCATCAGGGTGCCTATAGATTATGAGAAAATGTTGGAGGTAACAAAGCCATTAGTTCAGAGCTATGGACCCGCATACAAGTTACTAGAGAACAATCAATGTCTGTTTACATGCTGGAAAAATCGTCCACTCTATTCCATATCAGCATGGAGGTTCTGA 1218 0.4089 MVSPQFVCERIGLEGEERGIFLIRRLATCARLIENGELKDAGFGLKDMAGFVSADGDPMQRLATYFKMALSYRLIKSIRHVPQVLCFTNPWSTLEQQHARKLFFEYLPFLKFAYLITNQAIVEAMQRESKFHIIVLNAWNAAQWSNLLHTLKEQRKGTNTLQLLKITGIHENKEVLQEMESQLIQEAKNLNIPFEFYSIARQLEELSIEDFPVHPEEPIAISSVLHLHSLLAVDNDHHQVSPNDSDLPLKLRRFLSVLWKLHPRLMIITEQESDNNGSSLTDRLDEALNFYAALFDGLEANNVLKERAMKRIMLERMLLGEEIKNIIACDGADRKERHGKFLKTWRPSLELAEFIRVPIDYEKMLEVTKPLVQSYGPAYKLLENNQCLFTCWKNRPLYSISAWRF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1181 405 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 399 IPR005202 -
Prci7g1181 405 ProSiteProfiles GRAS family profile. 13 404 IPR005202 -
Prci7g1181 405 Pfam GRAS domain family 23 404 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1181 Prci-Chr7 28229466 28232474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1181 3 404 GRAS Transcription Factor Family AT1G50420 39.602 2.51e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g1181 GRAS 9.2e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1181 - - pcin:129316687 469.929