Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1180 ATGTCTTGGTGCTTCCTATTCCCTAATTCATTTCTCTCTGTCTCTCCTTCTATAGATTCGCCAAGGCAGGACCTCAAAGACATGAACGTGGAAGAAAGGGCCTTATACCTAGTTCATCTTTTGAAGACTTGTGCTAGGCATACAGAAGATGGTCAGTTCAAGAAGGCAAGCGCTGGACTTGAGTGCATTGCTAGTGTTGCTGCTCCTGATGGCGATCCAATGCAGAGGCTAGCTACTTACTTTCTTGATGGGCTTGCTTACAGGTTGGTCAAGAATATTCGTGGTGTGCCTGAAGCTCTAAATCTGTCAAATCCCTTGTCCACCTTAGCACAACAATATGCCAGAAAGTTGTTCTTTGAGTTTTGTCCATTCTTGAAGTTTTCTTATCTGATCTCCAATCAGACCATTGTAGAAGCCATGGAAGGAGAACAAGTGATTCATATTATTGATCTCAATGCCTGTGATGCTGGTCAATGGATATCCCTTCTTCATAGTTTGAAAGAACAACGACAAGGAAGTCCACTACCTTATGTGAAGATCACAGGGATTCATGAGAATAAAGGGGTTTTGGAACAAATGCGGATTCAGTTGATTGAAGAATCTGAGAAAATGAGCATCCCCTTAGATTTCTATCCCATTGAGAGCCAGTTAGAAAAACTTTGCTTTGACAAGTTGCCTGTGAAGCCAGGAGAGCTCCTTGCTGTAAGTTCTGTTCTTCAGCTACATTCTCTTCTGGCGGTTGAAGATCAGATCAGTCCTGATTCAGTCTTGCCACCTAATCCTTCGCAATTCGACTCACCTAAGATGAGGTGGTTTCTAAGTAGCCTTTGGAAACTCAAACCCAGATTGATGGTCATTACAGAACAAGAATCAGATAACAATGGGCCTTCTGTTACAGACAGGCTTGACAAGGCACTGAACTTCTATGCTGCACTGTTCCATTGCTTGGAAGGTAATGTTCCCAAAGCAAGAGCAATAGAGAGAATCATGATGGAGAGGATGCTTCTTGGGGAGGAGATAAAGAACATTATTACTTGTGATGGAGTTGACAGAAAAGAGAGGCATGGCAAGTTTTCAAATACATGGCATCCATGGCTGAAATTGGCTGGATTCAAGCGAGTGCCACTTCACTATGAAAGAATGTTGCAGGTAACAAGGCCATTGCAGAGCTATGGGCGTGGATACAAGTTACTAGAGAACAATCAATGTCTGCTCACATGCTGGAATGATCTTCCACTCTATTCTATATCAGCCTGGAGGTTCTAA 1266 0.4289 MSWCFLFPNSFLSVSPSIDSPRQDLKDMNVEERALYLVHLLKTCARHTEDGQFKKASAGLECIASVAAPDGDPMQRLATYFLDGLAYRLVKNIRGVPEALNLSNPLSTLAQQYARKLFFEFCPFLKFSYLISNQTIVEAMEGEQVIHIIDLNACDAGQWISLLHSLKEQRQGSPLPYVKITGIHENKGVLEQMRIQLIEESEKMSIPLDFYPIESQLEKLCFDKLPVKPGELLAVSSVLQLHSLLAVEDQISPDSVLPPNPSQFDSPKMRWFLSSLWKLKPRLMVITEQESDNNGPSVTDRLDKALNFYAALFHCLEGNVPKARAIERIMMERMLLGEEIKNIITCDGVDRKERHGKFSNTWHPWLKLAGFKRVPLHYERMLQVTRPLQSYGRGYKLLENNQCLLTCWNDLPLYSISAWRF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1180 421 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 415 IPR005202 -
Prci7g1180 421 Pfam GRAS domain family 37 420 IPR005202 -
Prci7g1180 421 ProSiteProfiles GRAS family profile. 28 420 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1180 Prci-Chr7 28224341 28225606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1180 20 420 GRAS Transcription Factor Family AT1G50420 44.072 8.69e-123 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g1180 GRAS 2.2e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1180 - - pcin:129316687 858.211