Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1179 ATGCAGTACCTTAGAGACATCAAACTGGAACGCAGGGGCCGGTACCTACCTCGTGTCCAAGCAACCTTTGCTAGGTTTACTGAAATCCGTGACTTTAACAATGCAAGTGCAGCACTTGAGAACACTGTTAGTGTTGCATCCCCTGATGGGGATCCGATGCAAATGGTGGTAACGTACTCAAATAAAGGGCTTGCTTACAGGTTGGTCAAGAATCCCTTGCCGACATTAGAACAACAGTATGACAGAAAGTTGTTCATTGACTTCTGCCCATTCTTGAAGTTTTCTTATCTGATCACCAATCAGGCTATTGTTGAAGCCATGAAAAGAGAACAAGTGTTTCATATTATAGATCTCAATGCATGTGATGCTACTCAATGGATATATCTTCTTCATACTTTAAAGGAACAACGCCAAGGAGACCAACTACTTATTATAAAGATAACTGGGATTCATAAGAATAAAGATGTTTTGGAACAAATAGAGTTTCAATTGATTCAAGAAGCTCAAAAAATGAACATCCCCTTACACTTCTCACCCATTGTAAGCCAATTGGAGAAACTTTGCTTTGAGAAATTGCCTCTGAAACCAGGGGAGCCCCTTGCTATAAGTTCTATTCTTCATCTTCATTCTCTTCTTGCAGTTGATGATCAAATCAGTCCTGATTCAGTCCTACCACCAAATTCTTTGCATTGTGTTTCACCTAAGATGAGGTGGTTTCTAAGTAGCCTTTGGAAACTCCAACCGAAGTTAATGGTCATTACAGAAAAAGAATCAGATAACAATGGGCATTCTTTGACAGACAGGCTTGATAAGGCACTGAACTTCTATACTCCACTGTTTGATTGCTTGGAAGCTAGTGTTCCAAAAGAAAAAGCAGAGGAGAGAATCATACTGGAGAGGATGCTTCTCGGAGAGGAGATAATAATAAAGAACATTATTATTGGTGATGGATTTGACAGAAAAGAGAGGCATGGTAAGTTTCTGAAGACATGGCACCCATTGCTTGATTTGGCCGGGTTTAGGAGGGTTCCTATTGACTATGAGACAATGTTGCAAGTAACAAGGCCATTGCAGAGTTATGGGAGTGGATACAAGTTGCTAGACTTCAATCAATATTCACCAAGGCAGGAGGACCTCAGAGACATGAACGTGAAAGAAAGGGCCTTATACCTAGTTCATCTTTTGAAGACTTGTGCTAGGTATACAGACGATGATGAGTTCAAGAAGGCAACCGCTGGACTTGAGCTAGTAATTCAGGCCAAGCCTGACAGGCCAACCCAGATAAACTTGAGTGCATTGCTAATCACCAATTGGACAAGACGACTAACTTCCATCAAGACTGAAACATCAGTGCTGTCCGAGACTGAAGTGAAGGTGACGGCTGGGACTAGACAACCAACTTCCACTGAGAGTAGACCATCAACTCCGACCAAGACTACAATGCAAGCGATCGTCTAA 1458 0.4177 MQYLRDIKLERRGRYLPRVQATFARFTEIRDFNNASAALENTVSVASPDGDPMQMVVTYSNKGLAYRLVKNPLPTLEQQYDRKLFIDFCPFLKFSYLITNQAIVEAMKREQVFHIIDLNACDATQWIYLLHTLKEQRQGDQLLIIKITGIHKNKDVLEQIEFQLIQEAQKMNIPLHFSPIVSQLEKLCFEKLPLKPGEPLAISSILHLHSLLAVDDQISPDSVLPPNSLHCVSPKMRWFLSSLWKLQPKLMVITEKESDNNGHSLTDRLDKALNFYTPLFDCLEASVPKEKAEERIILERMLLGEEIIIKNIIIGDGFDRKERHGKFLKTWHPLLDLAGFRRVPIDYETMLQVTRPLQSYGSGYKLLDFNQYSPRQEDLRDMNVKERALYLVHLLKTCARYTDDDEFKKATAGLELVIQAKPDRPTQINLSALLITNWTRRLTSIKTETSVLSETEVKVTAGTRQPTSTESRPSTPTKTTMQAIV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1179 485 Pfam GRAS domain family 22 366 IPR005202 -
Prci7g1179 485 MobiDBLite consensus disorder prediction 457 485 - -
Prci7g1179 485 ProSiteProfiles GRAS family profile. 7 396 IPR005202 -
Prci7g1179 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 367 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1179 Prci-Chr7 28218155 28221136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1179 4 366 GRAS Transcription Factor Family AT1G50420 40.284 1.87e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g1179 GRAS 5.5e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1179 - - pcin:129316686 932.939