Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1178 ATGGAATGGGAAGCGAAGAGCATTTTAATGGCCCGTCTTCTTCCCCACGGTGCTAAACTTACAGAAACTGGCGATATCGTGAGCGTCGTAACCACCCTCCAGAAAATCGCCACCCTCGCCGCCCCAGACGGCGACGCCCTTCAACGCGTCGCCACTTACGCCAACGAAGGCCTCGCTTATCGGATGCTCAATAAGTACATACCTGGTCTGTCGGAATCACTCCGGCTGACAAATCGCTTGTCAGCGTCGGAGCTGGTTCTTGTCCGGAGACTCTTCCGAGAGTTGTGTCCCTTCTTGATGTTCTCGTACTGGATCTCGAATCACGCCATCGCCGAAGCCATGAGAGGCGAACCGGTGATACATGTGATCGATTTCAACGCTTCCGATCCAGAGCAGTGGATCCATTTTCTTCATACATTGAAGGATCTGTGTCACGCGGATAATCGACCTCTGCCGTTTCTGAAAATCACGGGGATTCACGAGAAGAAGGAAGTTCTTGAACAAACGGGGTTTCTGTTGATGAGAGAGGCTGAGAAATTGAAATTCCCTTTCTTCTTTTATCCATTTGAGTGCAAATTGGAGAATCTGATGTTTGAAAAATTGCCTTTGAAGCCAGAAGAGCCTCTTGCAATCGTTTCTGTTCTTCAGCTCCATTCCCTTCTCGCTGCTGATGATAATCAAACGGCCACGACGGGGATTAATTCTCCTGCAGAGTTGCTTGGGAAACTTAGGATCAGACCAAGTCCTGATTCAGCTCTTTCTCCATGTGCTTCCCCTAAGATGGAGTGTTTTCTAAATGCAATCTGGAACCTCAAACCCAGGTTGATGCTCATCACTGAGCAAGAATCAAATGCTAACGAGCATGCTCTCAAGACAAGGCTAGAGAATGCACTCATATTCTACGGTGCACTCTTTGATTGCTTAGAAGCCAATGTTCCTAAAGCAAGAGAAGCAGATAGAACAATCATGGAGAGGATGCTTCTGGGTGAAGAAATCAAGAACATCATTGCTTGTGAAGGAGTTCAGAGAAAAGAGAGACATGAGAAAGCTGAGACATGGGTTCGATGGCTTGAGCTTGCTGGGTTTCAAAGAAGATCTTTGAGCTATGCTAGAATGTTGCAGGCAACAAGGCCATTGCAGAACTATGGAAGAGGATACAAGCTTATAGAGCATGATCAATGCCTCTTTGTTTGTTGGGATGATCGACCTCTCTACTCAATATCAGCATGGAAGTTCTAA 1239 0.4681 MEWEAKSILMARLLPHGAKLTETGDIVSVVTTLQKIATLAAPDGDALQRVATYANEGLAYRMLNKYIPGLSESLRLTNRLSASELVLVRRLFRELCPFLMFSYWISNHAIAEAMRGEPVIHVIDFNASDPEQWIHFLHTLKDLCHADNRPLPFLKITGIHEKKEVLEQTGFLLMREAEKLKFPFFFYPFECKLENLMFEKLPLKPEEPLAIVSVLQLHSLLAADDNQTATTGINSPAELLGKLRIRPSPDSALSPCASPKMECFLNAIWNLKPRLMLITEQESNANEHALKTRLENALIFYGALFDCLEANVPKAREADRTIMERMLLGEEIKNIIACEGVQRKERHEKAETWVRWLELAGFQRRSLSYARMLQATRPLQNYGRGYKLIEHDQCLFVCWDDRPLYSISAWKF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1178 412 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 406 IPR005202 -
Prci7g1178 412 Pfam GRAS domain family 12 411 IPR005202 -
Prci7g1178 412 ProSiteProfiles GRAS family profile. 1 411 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1178 Prci-Chr7 28190925 28193438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1178 4 411 GRAS Transcription Factor Family AT1G50420 43.409 3.05e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci7g1178 GRAS 2.1e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1178 - - pcin:129316687 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1178 7 28190925 28193438 Prci7g1178 7 28190925 28193438 ECH