Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1171 ATGCTGTGTTCGATGCTGAGGATGTCTTGGACGAGATTGATTATGAGGTGCTCAAGCGCAAGGTGGAAGCCGAACATCAGAGTAAAACCAGTGTTACGGCCAAGATTGCCAACAACATCTTTGGTGGATGAAACTAGAACATATGGTAGAGATGATGACAAAAAAACGATCATTGAATGGTTGCTATCAGACAAGGATAACACCCAGCTATCTATCATTTCTATAGTGGGTATGGGTGGATTGGGTAAAACTACCCTTGCCCAGCTCGTTTATAATGATAGGATGGCTATAGATGAATTTGACCTCAAAGCTTGGGTGTGCGTCTCTGATGAGTTTGATGTCCTAAGAGTAACAAGAACAATTTATGAGGCAATCACTATGTCTAGGGATGATACCAACGATTTAAACGTGCTTCAAATTAAATTGAAGCAGCGGTTGAGTCAGAAGAGATTTCTCATTGTTTTAGACGACGTGTGGAATGAAAATTTTATGCTATGGGAGGCCTTGCAATCACCTTTCAATCATGGGGCTCCTGGAAGTAAAATTCTTCTAACCACTCGCAGTGCAAAGGTTGTTTCAACCATGCGTTCTTCTAAAATACATTCATTGAAGCCCTTATCAGAAGGAGATAGTTGGCTGTTGTTAAGTGAATACGCATTCCATGGTAGAGATGCTCTTTCTTCAAGCTTTGACCTTGAAGAAATCGGTAGGAGAATAAGTAAAAAGTGCAAAGGGTTGCCTTTAGCTTTGAAAGCCATTGGGAGTCTCTTGTACGCGGAGTTTTCTCTTGTGCAATGGACTGGCATTTTAAAAAGTGAGATATGGGAGGAGAAAAGCGATAGCAAAATTCTCCCTTCTTTGAGATTGAGTTATCATTATCTCCCTTCTTTTCTCAAGAGATGCTTTGCTTATTGCTCTATATTCCCTAAAGATTATGACTTTGACAAGGAGCGTTTAATTCAGTTATGGATGGCAGAAAATTTTCTACCATGTGCCCATCAAAGCAAAGTTGCAAGAGAAGTAGGAGAACAATTCTTCCATGACTTATTGTCGAGGTCATTTTTTCAACAATCAATGGAAGATGAAACACGCTTTGTCATGCATGACCTTATTAATGATTTGGCAAAAGTTGAATATGGAAAATTTTGTCATCTGTTGCTGGTGGATGAAGAAAATAATTTGACAAAAATGACCCGGCATGTTTCATATTTAAGAACTTTCTATGAATACTCCAATCGATTTGCGGTTATGTGCCAGGCTAGTAAATTGCGAACGTTTTTGCCTCTATCTATGCAAGGACATAGAAGTACAAGCCATACCTCTTTCTTTCATTGCATATCTTTCAAGGTTATTCTCGATTTAGTATCCAAGTTCAGATGCATGCGTGTTTTATCTCTGTCTGGTTATCATCACATTGTGAGTTTGCCCGATTCCATAGGAAACCTCAAACATCTACGTTTTTTAGACTTATCAGGAACCAAGATAAAGAAATTGCCTGATTCAATCTGCCAACTTTTTCATTTACAAACGTTAAAGTTGTGGCGTTGTCGTGATTTGAAAAAGTTGCCCATGGATGTGCATAAACTCATGAATCTACGTTATCTTGATTTTCGTGAGACTGGAGTGAGAGAGATGCCAAAGCAATTGAGTAAATTGAAAAATCTTCAGGTGCTGTCATCATTTATTGTGGACAAATGTGGACAGTCAAACATTAAACAGTTGAAAGAATTTAATCTTTGTGGATCAGTTTCCATCTTAGAGTTGCAGAATGTAGTTTCTCCTGCTGATGCTTTGGCAGTTAATTTGAGAAACAAGATATACCTTAAGGAGTTAACATTAGAGTGGAGTATGGACCATGGAAAATTGCAAATTGACCAGGATGTCCTAGAGAAACTCCAACCTCATCAAAATTTAAAAAAGCTATCAATTAGCAACTATGGTGGTATCGGATTTCCTAGTTGGTTTGCAGACCATTCACTGTCCAACATAGTATCCCTAGAGCTGAGGAATTGCATATTCTGTATGTCCTTGCCATCACTAGGCCTTTTCCCATCTCTCAAGTCATTGTCAATTATGGGGTGTCACAGTGTACTGACCATTGGTCTAGAATTTCATGAAACCTCTACATCCCTAGAAATCTTGAGCTTTGGGGATATGAAGGGTTGGGAGGAATGGAAATGTGAAAATATGTCCAGTACTTTCTCGAATCTTCAGGAGTTGCGTATTGAAAATTGTCCCAAACTGAAAGGGCATCTTCCTCAACAACTTCCTTCTCTAACGATGCTGGTTATTTGCAATTGCGAGAAGCTTGTGGCTTCCATTCCGTGGGCTCCATCTCTTCATAAGTTGGTTTTAAGACATTGTGGAAAGGAGCAGATGGAATGTCTTCCATCAACTTTAAAAGTTCTCGAGATTTGTGGAGGCTTTGCAGAAATATTATCAGTTGAAAAAATTGAGAATACTATTTTCAATTCCACCATTGAAGAGTTGAAGTTTTCTGATTGTCCCCTCCTGGAATTCCCATTGCACTACTGTCATAACTTCATTTTTGAATTGGATATAAGGGGAAGATGTGACTCTCTGAAGTGTTTTCCACTATGTTTATTCCCCAATCTTCAGTCATTACTGTTGATTGAATGTAATAATCTTCAAACACTATCTGTTTCAGCGGGACAACATTACTCGCTTACAAGATTGTGGATACAAAGGTGTCCTAATTTTGTATTATTTCCTGAAGGTGGCTTTTCGGCCCCAGAGCTAGCATTTTGTTACATTGAAGGATTGAAGAATTTGAAGTTGCTGCCAGAGAAGATGCACATCGTCTTTCCCTCCCTTGCACATCTATCAATAAAATGCTGCCCACAAGTGGAATCATTTCCAATTGGAGGTTTGCCATTAAATCTTCAGCATCTTGACGTTTCAGGATGCCCAAAACTCATGGCCTCTCAAATGGGATGGCATTTGAGTAGACTTACTTCTCTACAACACTTGGGGATTGGAAATGTAGATGATGAGTTTCTTCCTAATACAATACTATTTCCACCTTCTCTTGTTACCATTTGGTTCTATAACTGTGCAAATCTTAGATCGCTCGAAAACAAAAGTCTTTGCCACTTGTCCTCTTTGGACTGCTTGGCTTTTCTTGACTGTCCTAAGCTCCAATACTTTCCGAAGGATGGTTTGCCGAGTTCCCTTACGATGCTAAAAATTACAGGCTGTCCCTTGCTGGAAAAGAAGATCCAAAAACAGAAAGGCAAATGCTGGGCAAAGATTTCTCACATCCCTCTTCTTGACATTGACCATGATATGATAATTTTAAGTGAGCTTCTGAATGATGAGCGCTTCAGCTTTCGTACTATCGCTTCACTCATTAGGGTCCCAAGCTGGGGACAATCATATATGGTGCTGCAACAACTCCAAACTCTGGTGCCTGGATAG 3438 0.3944 MLCSMLRMSWTRLIMRCSSARWKPNIRVKPVLRPRLPTTSLVDETRTYGRDDDKKTIIEWLLSDKDNTQLSIISIVGMGGLGKTTLAQLVYNDRMAIDEFDLKAWVCVSDEFDVLRVTRTIYEAITMSRDDTNDLNVLQIKLKQRLSQKRFLIVLDDVWNENFMLWEALQSPFNHGAPGSKILLTTRSAKVVSTMRSSKIHSLKPLSEGDSWLLLSEYAFHGRDALSSSFDLEEIGRRISKKCKGLPLALKAIGSLLYAEFSLVQWTGILKSEIWEEKSDSKILPSLRLSYHYLPSFLKRCFAYCSIFPKDYDFDKERLIQLWMAENFLPCAHQSKVAREVGEQFFHDLLSRSFFQQSMEDETRFVMHDLINDLAKVEYGKFCHLLLVDEENNLTKMTRHVSYLRTFYEYSNRFAVMCQASKLRTFLPLSMQGHRSTSHTSFFHCISFKVILDLVSKFRCMRVLSLSGYHHIVSLPDSIGNLKHLRFLDLSGTKIKKLPDSICQLFHLQTLKLWRCRDLKKLPMDVHKLMNLRYLDFRETGVREMPKQLSKLKNLQVLSSFIVDKCGQSNIKQLKEFNLCGSVSILELQNVVSPADALAVNLRNKIYLKELTLEWSMDHGKLQIDQDVLEKLQPHQNLKKLSISNYGGIGFPSWFADHSLSNIVSLELRNCIFCMSLPSLGLFPSLKSLSIMGCHSVLTIGLEFHETSTSLEILSFGDMKGWEEWKCENMSSTFSNLQELRIENCPKLKGHLPQQLPSLTMLVICNCEKLVASIPWAPSLHKLVLRHCGKEQMECLPSTLKVLEICGGFAEILSVEKIENTIFNSTIEELKFSDCPLLEFPLHYCHNFIFELDIRGRCDSLKCFPLCLFPNLQSLLLIECNNLQTLSVSAGQHYSLTRLWIQRCPNFVLFPEGGFSAPELAFCYIEGLKNLKLLPEKMHIVFPSLAHLSIKCCPQVESFPIGGLPLNLQHLDVSGCPKLMASQMGWHLSRLTSLQHLGIGNVDDEFLPNTILFPPSLVTIWFYNCANLRSLENKSLCHLSSLDCLAFLDCPKLQYFPKDGLPSSLTMLKITGCPLLEKKIQKQKGKCWAKISHIPLLDIDHDMIILSELLNDERFSFRTIASLIRVPSWGQSYMVLQQLQTLVPG 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1171 1145 FunFam Probable disease resistance protein At1g63360 291 377 - -
Prci7g1171 1145 SUPERFAMILY L domain-like 736 1090 - -
Prci7g1171 1145 ProSiteProfiles Leucine-rich repeat profile. 484 505 IPR001611 GO:0005515
Prci7g1171 1145 Gene3D - 291 378 IPR036388 -
Prci7g1171 1145 Pfam NB-ARC domain 51 271 IPR002182 GO:0043531
Prci7g1171 1145 PRINTS Disease resistance protein signature 243 257 - -
Prci7g1171 1145 PRINTS Disease resistance protein signature 480 496 - -
Prci7g1171 1145 PRINTS Disease resistance protein signature 72 87 - -
Prci7g1171 1145 PRINTS Disease resistance protein signature 145 159 - -
Prci7g1171 1145 Gene3D - 30 201 IPR027417 -
Prci7g1171 1145 Gene3D Ribonuclease Inhibitor 851 1131 IPR032675 -
Prci7g1171 1145 SUPERFAMILY L domain-like 366 795 - -
Prci7g1171 1145 PANTHER DISEASE RESISTANCE PROTEIN RP 38 698 IPR044974 GO:0006952
Prci7g1171 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 305 IPR027417 -
Prci7g1171 1145 Gene3D Ribonuclease Inhibitor 429 808 IPR032675 -
Prci7g1171 1145 Gene3D - 205 290 IPR042197 -
Prci7g1171 1145 FunFam Probable disease resistance protein At1g61300 34 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1171 Prci-Chr7 28148820 28154733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1171 73 700 WRKY Transcription Factor Family AT5G45050 24.288 2.00e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1171 - - pcin:129315888 1308.89