Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1168 ATGAGAATTGTCCTTGAAAATCTAGAATATCTTTCATCTCAGAAGGATATATTCAGATTGAATGAACGTGATAGTGGTGCTAGAGTAAGAAGCGCTATGCCAGATAGAGTGCCAACTACATCATTAGTGGATGAAGATGGAACATACGGTAGAGATGATGACAAAAAAACCATCATTGAATGGCTGCTGTCAGAAAAGTATGACAACCAACTATCTGTGATATCTATTGTGGGTATGGGTGGTCTGGGTAAAACTACTCTCGCCCAGCTTGTTTATAATGATAGAAGGGTGATGGATGAATTCAACCTCAAAGTATGGGTGTGTGTCTCCGATGAATTCGATGTCTTGAGGGTAACAAAAACAATTTATGAGGCAATCACCATATCTAAGGATGATACGAATGATTTAAATATGCTTCAAATTAAATTAAAACAAAAACTCGCTCAAAAGAGATTTCTCCTTGTTTTGGACGACATATGGAATGAAAATTTTATGCTATGGGAGGCCTTGCAATTACCACTCAATCATGGGGCTCCAGGAAGCAAAATTCTTCTAACCACTCGCAGTGGAAAAGTCGCTTCAACCATGCATTCTACTGAAATACTTTCATTGATGCCCTTATTAGAAGGAGACAGTTGGTCATTATTTAGCAGATATGCATTCCATGATGGAAATGTTCATGGTTCAACCTCTGACCTTGAAGAAATTGGTAGAAAAATCAGTAAAAAATGCAAAGGGTTGCCTTTAGCTTTGAAAGCCATTGGGAGTCTCTTGTACACAGAATTATCTCATGAGCAATGGAATGGCATTTTGAAAAGTGAGATATGGGAGGAAAATAGCGATAGCAAGATTCTCCCTGCTTTAAGATTGAGTTATTGCTGCCTCCCCTCTCATCTCAAAAGATGCTTTGCTTATTGTTCCATATTTCCCAAAGATTATGCTTTTGATAAAGAGCATGTAATTCAATTGTGGATGGCGGAAAATTTTCTGACATGTGCACATCAAAGCAAAGATGCAAGAGAAGTAGGAGAACAGTTCTTCCATGACCTATTGTTGAGGTCACTTTTTCAACAATCAACAGTCGATGAAACACATTTTGTCATGCATGACCTTATTAATGATTTGGCAAAAGTTGAATATGGAAAGTTTTGCCATAGACTGGAGGTAGATGATGTAAATAATTTGGCAAAAATGACCCGCCATGTTTCATTTTTGAGAAATGATTTTGATCCATCAGAAAGGTTTGAGATTATATACCAGGCTGATAAATTGCGCACATTCTTGCCTCTATCTATGCAGGGCCATAGAAGAACAAGCTATACCTCTGTTCTTAACTTTATATCTAGCAGGATTATTCACAATTTGCCATCCAAGTTTATTTGCATGCGAGTTTTATCTTTGGCGGATTATTTCATCATGCAATTGCCTGAATCAATAGGAAATCTCAAACATCTACGTTATTTGGACTTATCAGGAACTAAAATAAGGAAATTGCCTGATCCAATATGTCAACTTCATCATTTGCAGACACTAAAGTTGTGGCGTTGTTGTCTTTTGGAGAAGTTGCCAATGGATTTTCATAAACTGATGAATCTACGTCACCTTGATTTTCGTGAAACTCAGGTGAGAGAGATGCCAAAGCAATTGGATCAATTGAAAAATCTTCAAGTGCTGTCATCATTTATTGTAGACAAATCTAGAGAGACCAGCATCAAACACTTAGAAGGACTTAATCTTTATGGATCAATTTCCATATTGGAATTGCAGAATATAGTTTCTCCCTCAGATGCTTTAGCAGTCAATTTGAGAAGCAAGATACACCTCAAGGAGTTAACATTAGGATGGTGTATAGACAATGAAAAATCACAACATGACAAGGATGTGCTGGAGTACTTCCAACCTCATCAAAATTTAAAAAAGCTATCAATTGGCAACTATGGTGGTATTGAGATTCCAACTTGGCTTGCAGATCATTCATTGTCCAATATAGTGTCCCTAGAGCTAAGGAATTGCAAATACTGTATGTCCTTGCCATCACTTGGCCACTTTCCACAAGTCATTGTCAATTATAGGGTTTCATAG 2082 0.3727 MRIVLENLEYLSSQKDIFRLNERDSGARVRSAMPDRVPTTSLVDEDGTYGRDDDKKTIIEWLLSEKYDNQLSVISIVGMGGLGKTTLAQLVYNDRRVMDEFNLKVWVCVSDEFDVLRVTKTIYEAITISKDDTNDLNMLQIKLKQKLAQKRFLLVLDDIWNENFMLWEALQLPLNHGAPGSKILLTTRSGKVASTMHSTEILSLMPLLEGDSWSLFSRYAFHDGNVHGSTSDLEEIGRKISKKCKGLPLALKAIGSLLYTELSHEQWNGILKSEIWEENSDSKILPALRLSYCCLPSHLKRCFAYCSIFPKDYAFDKEHVIQLWMAENFLTCAHQSKDAREVGEQFFHDLLLRSLFQQSTVDETHFVMHDLINDLAKVEYGKFCHRLEVDDVNNLAKMTRHVSFLRNDFDPSERFEIIYQADKLRTFLPLSMQGHRRTSYTSVLNFISSRIIHNLPSKFICMRVLSLADYFIMQLPESIGNLKHLRYLDLSGTKIRKLPDPICQLHHLQTLKLWRCCLLEKLPMDFHKLMNLRHLDFRETQVREMPKQLDQLKNLQVLSSFIVDKSRETSIKHLEGLNLYGSISILELQNIVSPSDALAVNLRSKIHLKELTLGWCIDNEKSQHDKDVLEYFQPHQNLKKLSIGNYGGIEIPTWLADHSLSNIVSLELRNCKYCMSLPSLGHFPQVIVNYRVS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1168 693 PRINTS Disease resistance protein signature 480 496 - -
Prci7g1168 693 PRINTS Disease resistance protein signature 146 160 - -
Prci7g1168 693 PRINTS Disease resistance protein signature 244 258 - -
Prci7g1168 693 PRINTS Disease resistance protein signature 73 88 - -
Prci7g1168 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 306 IPR027417 -
Prci7g1168 693 Gene3D - 207 290 IPR042197 -
Prci7g1168 693 Gene3D - 30 202 IPR027417 -
Prci7g1168 693 ProSiteProfiles Leucine-rich repeat profile. 484 505 IPR001611 GO:0005515
Prci7g1168 693 PANTHER DISEASE RESISTANCE PROTEIN RP 20 680 IPR044974 GO:0006952
Prci7g1168 693 Gene3D Ribonuclease Inhibitor 432 688 IPR032675 -
Prci7g1168 693 Gene3D - 291 379 IPR036388 -
Prci7g1168 693 FunFam Probable disease resistance protein At1g61300 34 200 - -
Prci7g1168 693 Pfam NB-ARC domain 52 272 IPR002182 GO:0043531
Prci7g1168 693 SUPERFAMILY L domain-like 367 684 - -
Prci7g1168 693 FunFam Probable disease resistance protein At1g63360 292 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1168 Prci-Chr7 28077933 28082180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1168 443 571 WRKY Transcription Factor Family AT4G12020 32.308 1.83e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1168 - - pcin:129315888 1030.39