Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1128 ATGGCAGAGCTAGTTGGTGGAGCATTTCTCTCTGCAACCCTTCAGGTGGCTTTTGATAGATTGGCTTCTCGCGATATACTTGACTACTTCCGTGGCAGAAAACTCAATGAGGGCTTGCTCAAAAGGCTTCACATCACCCTTATATCTATTAACCAAGTTCTTGAAGATGCGGAGGAAAGTCAGTACAGAAACCCCAATGTGAAGCAGTGGCTTGATGAGCTTAAAGATGCTGTCTTTATTGCTGAGGACCTCCTGGATGAGATTGCAACTGAGGCATCGCGACAAAAGCTGGAATCTGAATATCGAGCCAACACGAGTAAGATTCTCTTGTCAAGCAAAATGAGTAGCAGCGAGCCGCCTATGCAAGTAATTACTATCGTGGGTATGGGTGGTGTGGGTAAGACCACCCTTGCGCAGCTTGTGTACAATGACAACAGGATGGAGGATCTGTTTCAACTTAAAGCTTGGGTGTGTGTTTCAGAAGAATTCAATGTTGTTCAAGTCACAAAAGCAATTCTTGAAGCAGTTGCTTGTTCCACTAAAGAGTCCAATGACTTGAATTTGCTTCAACTTCAGTTAAGGGAAAGATTGATGGGGAAGAAACTTTTCCTTGTTCTCGATGATGTTTGGAATGAGAATCGTACAACTTGGGAGATCTTGCAAGCTCCCTTCAACTATGGAACTCTAGGAAGTAAAATTTTTGTAACAACTCGCAATAAAAAGGTAGCATCAGTTATGCACTCTGCGCATATACATCATTTAAAACCTTTAGCAGAAGAAGATTCTTGGAAATTATTTGCAAAGCATGCATTTAATGACCAACGTAGTGGTATGGATTCAAATCTTGTATCAATTGGTAGAAAAATTGTCAAGAAATGCGGAGGATTGCCTTTAGCAATAAAAACTTTAGGTAGCATGTTGCACAGAGGACAATCTTGTCAGGAATGGGCTAATATATTAGAGAGTGATATATGGCATTTATCAGAGGATGACAGCAACATAATTCTAGCTTTAAGATTGAGTTACCATTACCTACCTTCAAATCTGAAATGTTGTTTTTCTTTTTGCTCTGTCTTTCCAAAAGATTATGAGATAGACAAGGATCTCTTAATCCAGTTGTGGATGGCAGAAGGTTTAGTGCATTCTTGGCGAAAAGACCAAAGCATTGAGGAAGTGGGCAATGAATTCTTCAATGATCTGGAGTCAAGATCATTTTTTGAGCCATCAAGGAGAAGAAATGGTCGATACTTCATTATGCATGACCTTTTGAATGATTTAGCAAAATCAGTGATGGGAGAATTTTGTTTTCTGCTGGACAGCAACTCTTCACAAAAGTGA 1338 0.3999 MAELVGGAFLSATLQVAFDRLASRDILDYFRGRKLNEGLLKRLHITLISINQVLEDAEESQYRNPNVKQWLDELKDAVFIAEDLLDEIATEASRQKLESEYRANTSKILLSSKMSSSEPPMQVITIVGMGGVGKTTLAQLVYNDNRMEDLFQLKAWVCVSEEFNVVQVTKAILEAVACSTKESNDLNLLQLQLRERLMGKKLFLVLDDVWNENRTTWEILQAPFNYGTLGSKIFVTTRNKKVASVMHSAHIHHLKPLAEEDSWKLFAKHAFNDQRSGMDSNLVSIGRKIVKKCGGLPLAIKTLGSMLHRGQSCQEWANILESDIWHLSEDDSNIILALRLSYHYLPSNLKCCFSFCSVFPKDYEIDKDLLIQLWMAEGLVHSWRKDQSIEEVGNEFFNDLESRSFFEPSRRRNGRYFIMHDLLNDLAKSVMGEFCFLLDSNSSQK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1128 445 FunFam Probable disease resistance protein At1g63360 342 429 - -
Prci7g1128 445 Pfam Rx N-terminal domain 9 102 IPR041118 -
Prci7g1128 445 Gene3D - 342 430 IPR036388 -
Prci7g1128 445 FunFam Probable disease resistance protein At1g61300 110 250 - -
Prci7g1128 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 356 IPR027417 -
Prci7g1128 445 Gene3D - 85 252 IPR027417 -
Prci7g1128 445 Gene3D - 256 341 IPR042197 -
Prci7g1128 445 PANTHER DISEASE RESISTANCE PROTEIN RP 46 438 IPR044974 GO:0006952
Prci7g1128 445 Pfam NB-ARC domain 113 321 IPR002182 GO:0043531
Prci7g1128 445 PRINTS Disease resistance protein signature 196 210 - -
Prci7g1128 445 PRINTS Disease resistance protein signature 123 138 - -
Prci7g1128 445 PRINTS Disease resistance protein signature 293 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1128 Prci-Chr7 27728480 27734374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1128 106 307 WRKY Transcription Factor Family AT5G45050 30.986 1.84e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1128 - - pcin:129299815 839.721