Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1116 ATGCTGTGTTCGATGCTGAGGATGTCTTGGACGAGATTGATTATGAGGTGCTCAAGCGCAAGGTGGAAGCCGAACATCAGAGTAAAACCAGTGTTACGGCCAAGATTGCCAACAACATCTTTGGTGGATGAAACTAGAACATATGGTAGAGATGATGACAAAAAAACGATCATTGAATGGTTGCTATCAGACAAGGATAACACCCAGCTATCTATCATTTCTATAGTGGGTATGGGTGGATTGGGTAAAACTACCCTTGCCCAGCTCGTTTATAATGATAGGATGGCTATAGATGAATTTGACCTCAAAGCTTGGGTGTGCGTCTCTGATGAGTTTGATGTCCTAAGAGTAACAAGAACAATTTATGAGGCAATCACTATGTCTAGGGATGATACCAACGATTTAAACGTGCTTCAAATTAAATTGAAGCAGCGGTTGAGTCAGAAGAGATTTCTCATTGTTTTAGACGACGTGTGGAATGAAAATTTTATGCTATGGGAGGCCTTGCAATCACCTTTCAATCATGGGGCTCCTGGAAGTAAAATTCTTCTAACCACTCGCAGTGCAAAGGTTGTTTCAACCATGCGTTCTTCTAAAATACATTCATTGAAGCCCTTATCAGAAGGAGATAGTTGGCTGTTGTTAAGTGAATACGCATTCCATGGTAGAGATGCTCTTTCTTCAAGCTTTGACCTTGAAGAAATCGGTAGGAGAATAAGTAAAAAGTGCAAAGGGTTGCCTTTAGCTTTGAAAGCCATTGGGAGTCTCTTGTACGCGGAGTTTTCTCTTGTGCAATGGACTGGCATTTTAAAAAATTATGACTTTGACAAGGAGCGTTTAATTCAGTTATGGATGGCAGAAAATTTTCTACCATGTGCCCATCAAAGCAAAGTTGCAAGAGAAGTAGGAGAACAATTCTTCCATGACTTATTGTCGAGGTCATTTTTTCAACAATCAATGGAAGATGAAACACGCTTTGTCATGCATGACCTTATTAATGATTTGGCAAAAGTTGAATATGGAAAATTTTGTCATCTGTTGCTGGTGGATGAAGAAAATAATTTGACAAAAATGACCCGGCATGTTTCATATTTAAGAACTTTCTATGAATACTCCAATCGATTTGCGGTTATGTGCCAGGCTAGTAAATTGCGAACGTTTTTGCCTCTATCTATGCAAGGACATAGAAGTACAAGCCATACCTCTTTCTTTCATTGCATATCTTTCAAGGTTATTCTCGATTTAGTATCCAAGTTCAGATGCATGCGTGTTTTATCTCTGTCTGGTTATCATCACATTGTGAGTTTGCCCGATTCCATAGGAAACCTCAAACATCTACGTTTTTTAGACTTATCAGGAACCAAGATAAAGAAATTGCCTGATTCAATCTGCCAACTTTTTCATTTACAAACGTTAAAGTTGTGGCGTTGTCGTGATTTGAAAAAGTTGCCCATGGATGTGCATAAACTCATGAATCTACGTTATCTTGATTTTCGTGAGACTGGAGTGAGAGAGATGCCAAAGCAATTGAGTAAATTGAAAAATCTTCAGGTGCTGTCATCATTTATTGTGGACAAATGTGGACAGTCAAACATTAAACAGTTGAAAGAATTTAATCTTTGTGGATCAGTTTCCATCTTAGAGTTGCAGAATGTAGTTTCTCCTGCTGATGCTTTGGCAGTAATTTGA 1689 0.3866 MLCSMLRMSWTRLIMRCSSARWKPNIRVKPVLRPRLPTTSLVDETRTYGRDDDKKTIIEWLLSDKDNTQLSIISIVGMGGLGKTTLAQLVYNDRMAIDEFDLKAWVCVSDEFDVLRVTRTIYEAITMSRDDTNDLNVLQIKLKQRLSQKRFLIVLDDVWNENFMLWEALQSPFNHGAPGSKILLTTRSAKVVSTMRSSKIHSLKPLSEGDSWLLLSEYAFHGRDALSSSFDLEEIGRRISKKCKGLPLALKAIGSLLYAEFSLVQWTGILKNYDFDKERLIQLWMAENFLPCAHQSKVAREVGEQFFHDLLSRSFFQQSMEDETRFVMHDLINDLAKVEYGKFCHLLLVDEENNLTKMTRHVSYLRTFYEYSNRFAVMCQASKLRTFLPLSMQGHRSTSHTSFFHCISFKVILDLVSKFRCMRVLSLSGYHHIVSLPDSIGNLKHLRFLDLSGTKIKKLPDSICQLFHLQTLKLWRCRDLKKLPMDVHKLMNLRYLDFRETGVREMPKQLSKLKNLQVLSSFIVDKCGQSNIKQLKEFNLCGSVSILELQNVVSPADALAVI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1116 562 FunFam Probable disease resistance protein At1g61300 34 199 - -
Prci7g1116 562 PRINTS Disease resistance protein signature 145 159 - -
Prci7g1116 562 PRINTS Disease resistance protein signature 243 257 - -
Prci7g1116 562 PRINTS Disease resistance protein signature 441 457 - -
Prci7g1116 562 PRINTS Disease resistance protein signature 72 87 - -
Prci7g1116 562 Gene3D - 30 201 IPR027417 -
Prci7g1116 562 Pfam NB-ARC domain 51 272 IPR002182 GO:0043531
Prci7g1116 562 PANTHER DISEASE RESISTANCE PROTEIN RP 38 534 IPR044974 GO:0006952
Prci7g1116 562 SUPERFAMILY L domain-like 327 551 - -
Prci7g1116 562 Gene3D - 205 285 IPR042197 -
Prci7g1116 562 ProSiteProfiles Leucine-rich repeat profile. 445 466 IPR001611 GO:0005515
Prci7g1116 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 274 IPR027417 -
Prci7g1116 562 Gene3D Ribonuclease Inhibitor 388 555 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1116 Prci-Chr7 27649081 27651464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1116 64 260 WRKY Transcription Factor Family AT5G45050 28.358 1.46e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1116 - - pcin:129316673 1125.15