LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1109	ATGAAAAATGTCCTTGATAATCTCGAGTATCTTGCGTCTCAAAAGGCTATATTAAGATTAAATGAACTTGATAGTGGTGCTGGATTGAGAAATGCAGTATCATATAGATTGCCTACAACATCTTTGGTGGATGAAGGTAGAACGTACGGGAGAGATGATGACAAAGAAAAGATCATTGAATGGTTGTTATCAGCCAATGATAACAATCAACTATCAGTCAATTCTATAGTGGGTATGGGTGGGTTAGGTAAAACTACTCTTGCCCAACTTGTTTACAACGATAGGAGGGTGATGGATGAATTTGATATTAGAGTTTGGGTGTGTGTTTCTGAAGATTTTGATGTCCTGAGGTTAACAAGAACAATTTATGAGGCAATCACCATGTCAAAGGCTGATACTAATGATCTAAATATGCTTCAAATCAAATTGAAGCAGTTGCTAACTCAGAAGAGATTTTTTCTTGTTTTAGACGATGTGTGGAATGAAGACTATGAGCAATGGGAGGCTTTACAATCACCTTTTAGTTATGGGGCATCTGGAAGCAAAGTTCTTCTAACCACCCGCAGTAGAAAAGTTGTTTCAACCATGCGTTCTACTGAAATACTTCCATTGAAGCCCTTATCAGAAGGAGATAGTTGGTTGCTACTTAGCATATATGCATCCCGCGATGGAGATATTCTTCGCTCAAACTCTGACCTTGAAGAAATTGGTAGAAAAATCAACAAAAAGTGCAAAGGGTTACCTCTAGCTTTGAAAGCAATTGGGAGTCTCTTGTACACGGAATTATCTCATGAGCAATGGAATGGCATTTTGAAAAGTGAGATATGGGAGGAGAAGAGTGATAGCAAAATTCTCCCTGCATTGAGATTGAGCTATTGTTACCTCCCCTCTCATCTCAAGAAATGCTTCGCTTATTGCTCAATATTTCCCAAAGATTATGATTTTGAGAAGGAGAATCTAATTCAATTGTGGATGGCAGAAAATTTTCTTCCACGTTCTAATCAAAGCAAAAATGCAAGAGAAGTAGGAGAGCAATTCTTCCATGATCTTTTGTCAAGGTCACTTTTTCAACAATCAACAGGAGATGAAACACGTTTTGTCATGCATGACCTTATTAATGACTTGGCCAAAGCTGAATATGGAAAGTTTTGTCATAGGTTGGAGGTAGATGAGGCAAATAATCTGACAAAAATGACCCGCCATGTTTCATACTTAAGAACTGATAATGATTCTCCCAAACGGTTTGAGGATATATACCATGCTAATAGATTACGCACCTTCTTGCCACTATCCATGCAAGGTCATAGAAGTACAAGTTGCACCTCGTTTATTCATTTGATATCTAGCAAGATTATTCATGATCTGCTGTCAAAGTTTAGTTGCATGCGAGTTCTATCTCTATCTGATTATTATCACATTGTGGGGTTGCCCAATTCAATAGGCAATCTCAAACATCTACGATATTTGGACTTGTCAGGAACTAAACTAAGGAAATTGCCTGATTCAATATGCCAACTTTATCATTTGCAAACTTTAAAGTTGTGGCGTTGTTATAATTTGGAGAAGTTGCCCATGAATTTGCATAAACTCATTAATCTACGACATCTTGATTTTCGTGAAACTCAGGTGAGAGAGATGCCAAAGCAACTGGGTGAATTTAAAAATCTCCAGGTCCTATCACCATTTATTGTGGACAAATATGGTGAGGCCAATATTAAACAATTAACAGAACTTAATCTTTGTGGATCAGTTTCCATTTTAGAGTTGCAGAATGTAGTTTCTCTTGCAGATGCTTTTGGGGTCAATTTGAAAAGCAAGACATACGTTAAGGAGTTGGTGTTAGAGTGGAGCATAAACAATGAAGAATCACAACATGACAAGAATGTGCTAGAGATGCTTGAACCTCATCCAAACTTAAAAAGGCTATCAATTAGCAACTATGGTGGTATTAGGTTTCCAGATTGGTTTACTAAGTTTGCACTGTCCAACATAGTGTCACTGGAGTTGAAGAATTGCAAATGGTGTTTGTCCTTGCCGTCATTAGACCTCCTTCCATCTCTAAAGTCTCTATTAATTACCGGGTTTCACAGTATAGTGACTATAGGTCCAGACTTTTATGGAAATGGCTCTACCACTACGTCCTTGGAAATCTTGAGGTTTAGAGATATGATGACTTGGGTAGAATGGAAATGTGACGTTGTCTTGAGTGCTTTCCCATATCTTCAAGAGTTGAGTATAGAAAATTGTCCCAATCTAAAGGGGCACCTTCCTCAACAACTTCCTTCTCTAAGGATGTTGGTCATAAACGATTGTGAGAAGTTTGTGGCTTCAATTCCTTGTGCTCCATCTCTTCATAAATTGGTTCTAAGAAATTGTGGAAAGGACCATTTGGAATATCTTCCATCAACTCTAAAAGTTCTCGACATTTCAGGACGCTTTGAAAAAATGTTATCCATTGAAATGATTGATGATACTATTGCCAACTCCAACCTTGAAAAGTTGAAGTTTTTTGATTGTCCATTGCTAGAATTCCCATTGTTCTACTCTCATAACTTCATTCTTGAAATGGAGATAAGAGGAAGATGCAACTCTTTGATGTTTTTTCCACTAGATTCATTCCCAATGCTTCAATCATTGCGGTTGATTGACTGTAATAATCTTGAGATCATATCTGTTTCAAAGGGACATCATCAGTCTCTTACAAGCTTGTACATACGAAAGTGTCCTAAATTAGTATCATTTCCCAAAGGAGGGTTTTTAGCCCCAAATTAG	2772	0.3752	MKNVLDNLEYLASQKAILRLNELDSGAGLRNAVSYRLPTTSLVDEGRTYGRDDDKEKIIEWLLSANDNNQLSVNSIVGMGGLGKTTLAQLVYNDRRVMDEFDIRVWVCVSEDFDVLRLTRTIYEAITMSKADTNDLNMLQIKLKQLLTQKRFFLVLDDVWNEDYEQWEALQSPFSYGASGSKVLLTTRSRKVVSTMRSTEILPLKPLSEGDSWLLLSIYASRDGDILRSNSDLEEIGRKINKKCKGLPLALKAIGSLLYTELSHEQWNGILKSEIWEEKSDSKILPALRLSYCYLPSHLKKCFAYCSIFPKDYDFEKENLIQLWMAENFLPRSNQSKNAREVGEQFFHDLLSRSLFQQSTGDETRFVMHDLINDLAKAEYGKFCHRLEVDEANNLTKMTRHVSYLRTDNDSPKRFEDIYHANRLRTFLPLSMQGHRSTSCTSFIHLISSKIIHDLLSKFSCMRVLSLSDYYHIVGLPNSIGNLKHLRYLDLSGTKLRKLPDSICQLYHLQTLKLWRCYNLEKLPMNLHKLINLRHLDFRETQVREMPKQLGEFKNLQVLSPFIVDKYGEANIKQLTELNLCGSVSILELQNVVSLADAFGVNLKSKTYVKELVLEWSINNEESQHDKNVLEMLEPHPNLKRLSISNYGGIRFPDWFTKFALSNIVSLELKNCKWCLSLPSLDLLPSLKSLLITGFHSIVTIGPDFYGNGSTTTSLEILRFRDMMTWVEWKCDVVLSAFPYLQELSIENCPNLKGHLPQQLPSLRMLVINDCEKFVASIPCAPSLHKLVLRNCGKDHLEYLPSTLKVLDISGRFEKMLSIEMIDDTIANSNLEKLKFFDCPLLEFPLFYSHNFILEMEIRGRCNSLMFFPLDSFPMLQSLRLIDCNNLEIISVSKGHHQSLTSLYIRKCPKLVSFPKGGFLAPN	923

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1109	923	Gene3D	Ribonuclease Inhibitor	796	919	IPR032675	-
	Prci7g1109	923	PRINTS	Disease resistance protein signature	73	88	-	-
	Prci7g1109	923	PRINTS	Disease resistance protein signature	146	160	-	-
	Prci7g1109	923	PRINTS	Disease resistance protein signature	244	258	-	-
	Prci7g1109	923	PRINTS	Disease resistance protein signature	481	497	-	-
	Prci7g1109	923	FunFam	Probable disease resistance protein At1g61300	36	200	-	-
	Prci7g1109	923	SUPERFAMILY	L domain-like	367	773	-	-
	Prci7g1109	923	ProSiteProfiles	Leucine-rich repeat profile.	485	506	IPR001611	GO:0005515
	Prci7g1109	923	PANTHER	DISEASE RESISTANCE PROTEIN RP	38	749	IPR044974	GO:0006952
	Prci7g1109	923	Gene3D	-	291	379	IPR036388	-
	Prci7g1109	923	SUPERFAMILY	RNI-like	686	915	-	-
	Prci7g1109	923	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	33	306	IPR027417	-
	Prci7g1109	923	Gene3D	-	30	202	IPR027417	-
	Prci7g1109	923	Pfam	NB-ARC domain	52	272	IPR002182	GO:0043531
	Prci7g1109	923	Gene3D	Ribonuclease Inhibitor	442	793	IPR032675	-
	Prci7g1109	923	SMART	LRR_typ_2	483	506	IPR003591	-
	Prci7g1109	923	SMART	LRR_typ_2	530	553	IPR003591	-
	Prci7g1109	923	FunFam	Probable disease resistance protein At1g63360	292	378	-	-
	Prci7g1109	923	Gene3D	-	206	290	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1109	Prci-Chr7	27612426	27618846	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1109	75	377	WRKY Transcription Factor Family	AT5G45050	27.564	7.46e-12	67.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1109	-		-	pcin:129315888	1837.77