Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1035 ATGGCCGATTCCTTCTCCGACGACAAGCTTTGCGGCTTCCTACTTGCGGTTCTCGCTGTGACTCCCTCGCAGCCCGACCCGTGTTCCAGTTTAGCCTTCCAAGAGCGCTGCGACATCTTCGCGGACTGTTCTAATGCCGCCGGATTTAGGTCCGGCAACGGCGTCGTTTTGATTCCGGTGGATTCGGCTGCGAAGCTGAATGAAGGCGGGAACGCGTCTTCTTCTGATTCAGCGCAGTGCAAAGTGGTGGGGAGGGAATCTACGATTGACTTCGGCTGCATTAGTTATAGTACGCCTCGGGGTTCGCGAAAGGGCAATGTAAGAAGAAAAAATTGGCTGGTTTCAGGGAGTGGTAGCTTGAGGAGGAAGAGGATGACGAAGATTGGGATGGTGAATGGGAGTGTTAGCGTGATTCACCAGCTCCACGCTTTGGTTAGCAAAAAGTGCTTGAAGATTGATGCTCGAGTGGTTTTGGTTGAGCTTGGAGACTGTGGGGAGGCTAGAGCTGTGGTATTGGTCGATGTGTATCTCCCAATTGCATTGTGGAGTGGCTGGCAGTTTCCAAAATACGGGTCCACTGCTGGTGCTCTTTTTAGGCATTTGAGGTGTGACTGGGATGAGAGAAGATCAATTCTTTCTTGTTCAGACAATATTAGGAAGATTCAGGGGGCCAGTAAGAGCATTTGGAACCTTAGTGACTGTCATGTATTTGGGTGCAAACTCCACTACCATGCAAGAGATTCTTCAAAGAATAGTCTATTTGAACTCCATGAAATTTTTAAGAGCATGCCTGGTGTAGGAAAAGACCGGAAGCCCGCTAATTCCAGGATAGTACCATTGAATGACTCTTGGAGATCTGGAATTTGGGAGTTATCTGATGACATTTTAACAAAAATTCTAGCTCCCCTAGACCCAATGGACATTGCTAGGGTTTCAGCAACTTGTCGCCATTTGAGATCCTTGGCTGCTTTAATAATGCCTTGTACAAAGTTAAAATTGTTTCCTCACCAGCAGACAGCTGTTGAGTGGATGTTGCATCGGGAGCGAAATGCTGAACGCTTGGCACATCCTTTGTTTGTTTCTTTTTCAACAGAGGATGGCTTTATTTTCCATGTAAATACTGTATCTGGTGAAATAGTCACTGGGGAAGCTCCCTCCATTAAAGATTTTTGTGGCGGAATGTTCTGTGATGAGCCTGGTTTGGGTAAGACTGTAACTACTCTTTCTCTTGTATTGAAGACACAAGGTTTGTTGGCAGATCCACCGGATGGAGCGAAGGTGGTTTGGTGTCACCATAATGGTAATCTTAAATGTGGTTATTATGATGTTGTTGGTAGTTACATAATTGACAGTAGTAATTTGGGGAAGAGGGACATATGCCAGGATGCTAGGAATAATGAGCACCATGATCACTCCTCCAAACGAGCTAGATTGAAGGTTCTTGTTGAGAGAACTAGTGGACTTAATAAATGTTCTTGGGAAGAAAAGAAATCACCTGTGGGCGAATACTCTGAGCATCTAATGGCTGCAAGTCGATGCTCTTGGGGTGTGAGTTGCATTAAGAAAAATCTCTGTGCCACTTTTGATGAGGAAGCTGGGCATTCCCAAGAAAGAAAAGATAGTTTAAACTCTTTGAAACTAGAACATGCAGCAAATGCTGAAACACATGAATTCGAAAATAAGCCAGTTGATACTTCATATGGAAATGGAAAGGGCAGGGGACCTGAGAAGCCTACAGTGGATTCTTCTGAATGCAATGACACTTGGATTCAGTGTGATGCTTGCCAGAAATGGCGAAAGCTTGCAGATGCCAGTATGGCTAATACTAATGCAGCGTGGTTTTGTAGTATGAACACTGATCCTCTGTATCAGAGTTGTGGCATCCCAGAACAACCCTGTCATAATAGCTATGAAATAACTTATTTACCAGGATTTCATGTGAAAGGTAGTGCAGCGGGTGAGAAGAAGAATGTTTCATTTTTCACTGGTGTACTTAAGGAGCATTACACAATGATAAATTCTGAGACAAAGAAAGCCCTGACTTGGTTGGCCAGACTTCCTCCTGACAAGCTTTCTGAAATGGAAATAAATGGCATAAGGGGTCCTGTTTTAAGCACCTGCACTGTGTCTAGCGGATATCTTAATCCATACCACAAGATATTTCAAGCATTCGGTCTCATTAAGAGATTAGAGAAAGGTGTAAACAAGTGGTACTACCCTCGAAATCTAAATAACTTGGCTTTTGATGTAACTGCCCTTGGCATGGCTCTGCGTGAGCCGTTAGATTCATTTAGGCTATACTTGTCAAGAGCAACCCTTATAGTTGTTCCTGCTAACTTGGTTGATCACTGGAAAACTCAAATTGAAAAGCATGTCAAACATAGTCAACTGCGAGTTTTTGTTTGGAATGATACTTGGAGATGGAAGCCATCTGTGCATAGTCTGGCATGGGATTATGATGTTGTCATTACTACATTTAGTCGACTGAGTGCAGAGTGGAGCCCACGTAAGAGAAGTGTTCTGATGCAAGTCCATTGGCTTAGGGTCATATTAGATGAAGGGCACACTCTTGGCTCAAGCCTAAACTTAACAAACAAGTTGCAAATGGCTATTTCTTTGACAGCTTCAAATCGTTGGATACTAACAGGAACACCAACACCTAACACTCCTAAAAGTCAACTATCACATTTACAGCCATTGCTAAGATTCCTTCATGAAGAAGCTTATGGGCTGAATCCAAAGGCATGGGAGGTTGGCATCCTTAAGCCATTTGAGGCAGAGATGGAAGAAGGAAGGTTTCGTCTGTTGCATCTACTTCGTAACTGCATGATTAGTGCAAGGAAGATAGACTTACATAATATTCCCCCATGTATCAAGAAAGCTGTTTTTCTGGATTTTACTGAGGAGCATGCCAGAAGTTATAATGAATTGGTATTAACAGTTCGTCGTAATATATTAATGGCTGATTGGAATGACCCTTCACACATTGAGAGTCTACTGAATCCAAAACAATGGAAATTTAGGAGTGCAACTATAAAAAATGTTAGGCTGTCGTGCTGTGTAGCCGGACATATTAAAGTTACACATGCTGGTGAAGATATTCAGGAAACAATGGATATGTTAGTAGAAAGTGGTGTGGATCCTGATTCAGCTGAGTATTCCTCCATAAGATATAATCTGCTTTGTGGTGGCCAGTGTGTCAGGTGCAAGGAATGGTGCCGTCTTCCCTTCATTACACCATGTCGGCATCTGTTGTGCCTTGACTGTGTCTCTTTAGACAGTATGAAGTGTACTTATCCTGGATGTAATAAATTATATGAGATGCAGCATCCTGATACACTAGCCCGCCCTGAAAATCCTAGCCCAAAGTGGCCTGTGCCCAAAGATCTTATCGAGCTACAACCTTCATATAAACAGGATGATTGGGATCCTGATTGGCAATCGACATCTAGTAGCAAAGTGTCCTATCTTATCCAGAGATTGAAAGCTTTGCAAGAATCCAATAAGGAGAAGGGATGCTATAATAGCAATGATCAGGTTCTTGCTGAGAGCAGTCGCCCTCTGCTGAGGGGAGATGTGAAATCATCATTCCAGCAATGCCCTCTAAGCACTGAGCCCAATAATAGGCCTGAGAAAGTTCTTATATTTTCTCAATTTCTTGAGCATATTCATGTCATTGAACAGCAATTGGCTATTGCTGATATTAAATATTCTGGGATGTATAGTCCAATGCCTTTAAGCAACAAGAAGAAGTCACTTGCCACATTCCAGCATGATCGCAGTTGTATGGCACTTGTGATGGATGGAAGTGCTGCATTGGGTCTTGACTTGAGTTTTGTTACACACGTGTTTTTAATGGAACCAATCTGGGATAGAAGCATGGAGGAACAAGTAATTAGTCGTGCTCACCGTATGGGTGCTTGTCGTCCCATTCATGTGGAAACCTTAGCAATGCGTGGTACAATTGAAGAGCAAATGCTAGAATTTTTACAGGATGCTGATAGAAGTAGAAACTCCCCTATTGAAGTTGTTGTCCAATCTGATGATGGTAGAAAATTCCCGGCTAAAGGTGTCATACAATTTGAAGATGAAGGGGGACGGAGACGTTCTTTGCATGATTTTGCAGAAAATAGTTATCTACTGAAACTTAGATTTGTGAACACCAATCCTAATGCCGTAGAAGGTGTCTGA 4191 0.4297 MADSFSDDKLCGFLLAVLAVTPSQPDPCSSLAFQERCDIFADCSNAAGFRSGNGVVLIPVDSAAKLNEGGNASSSDSAQCKVVGRESTIDFGCISYSTPRGSRKGNVRRKNWLVSGSGSLRRKRMTKIGMVNGSVSVIHQLHALVSKKCLKIDARVVLVELGDCGEARAVVLVDVYLPIALWSGWQFPKYGSTAGALFRHLRCDWDERRSILSCSDNIRKIQGASKSIWNLSDCHVFGCKLHYHARDSSKNSLFELHEIFKSMPGVGKDRKPANSRIVPLNDSWRSGIWELSDDILTKILAPLDPMDIARVSATCRHLRSLAALIMPCTKLKLFPHQQTAVEWMLHRERNAERLAHPLFVSFSTEDGFIFHVNTVSGEIVTGEAPSIKDFCGGMFCDEPGLGKTVTTLSLVLKTQGLLADPPDGAKVVWCHHNGNLKCGYYDVVGSYIIDSSNLGKRDICQDARNNEHHDHSSKRARLKVLVERTSGLNKCSWEEKKSPVGEYSEHLMAASRCSWGVSCIKKNLCATFDEEAGHSQERKDSLNSLKLEHAANAETHEFENKPVDTSYGNGKGRGPEKPTVDSSECNDTWIQCDACQKWRKLADASMANTNAAWFCSMNTDPLYQSCGIPEQPCHNSYEITYLPGFHVKGSAAGEKKNVSFFTGVLKEHYTMINSETKKALTWLARLPPDKLSEMEINGIRGPVLSTCTVSSGYLNPYHKIFQAFGLIKRLEKGVNKWYYPRNLNNLAFDVTALGMALREPLDSFRLYLSRATLIVVPANLVDHWKTQIEKHVKHSQLRVFVWNDTWRWKPSVHSLAWDYDVVITTFSRLSAEWSPRKRSVLMQVHWLRVILDEGHTLGSSLNLTNKLQMAISLTASNRWILTGTPTPNTPKSQLSHLQPLLRFLHEEAYGLNPKAWEVGILKPFEAEMEEGRFRLLHLLRNCMISARKIDLHNIPPCIKKAVFLDFTEEHARSYNELVLTVRRNILMADWNDPSHIESLLNPKQWKFRSATIKNVRLSCCVAGHIKVTHAGEDIQETMDMLVESGVDPDSAEYSSIRYNLLCGGQCVRCKEWCRLPFITPCRHLLCLDCVSLDSMKCTYPGCNKLYEMQHPDTLARPENPSPKWPVPKDLIELQPSYKQDDWDPDWQSTSSSKVSYLIQRLKALQESNKEKGCYNSNDQVLAESSRPLLRGDVKSSFQQCPLSTEPNNRPEKVLIFSQFLEHIHVIEQQLAIADIKYSGMYSPMPLSNKKKSLATFQHDRSCMALVMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGACRPIHVETLAMRGTIEEQMLEFLQDADRSRNSPIEVVVQSDDGRKFPAKGVIQFEDEGGRRRSLHDFAENSYLLKLRFVNTNPNAVEGV 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1035 1396 CDD RING-HC 1066 1091 - -
Prci7g1035 1396 CDD SF2_C_SNF 1209 1316 - -
Prci7g1035 1396 CDD DEXDc_SHPRH-like 758 944 - -
Prci7g1035 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 768 940 IPR027417 -
Prci7g1035 1396 Gene3D - 753 947 IPR038718 -
Prci7g1035 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 414 IPR027417 -
Prci7g1035 1396 ProSitePatterns Zinc finger RING-type signature. 1081 1090 IPR017907 -
Prci7g1035 1396 MobiDBLite consensus disorder prediction 554 582 - -
Prci7g1035 1396 SMART ultradead3 329 927 IPR014001 -
Prci7g1035 1396 Pfam SNF2-related domain 336 989 IPR000330 GO:0005524|GO:0140658
Prci7g1035 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1333 IPR027417 -
Prci7g1035 1396 ProSiteProfiles Zinc finger CW-type profile. 583 634 IPR011124 GO:0008270
Prci7g1035 1396 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 165 1332 - -
Prci7g1035 1396 Pfam F-box domain 290 322 IPR001810 GO:0005515
Prci7g1035 1396 Pfam CW-type Zinc Finger 588 631 IPR011124 GO:0008270
Prci7g1035 1396 SMART fbox_2 291 331 IPR001810 GO:0005515
Prci7g1035 1396 CDD F-box_SF 290 322 - -
Prci7g1035 1396 Gene3D - 1107 1356 IPR027417 -
Prci7g1035 1396 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1196 1349 IPR001650 -
Prci7g1035 1396 SMART helicmild6 1224 1306 IPR001650 -
Prci7g1035 1396 Pfam Helicase conserved C-terminal domain 1207 1306 IPR001650 -
Prci7g1035 1396 Gene3D - 579 633 - -
Prci7g1035 1396 SUPERFAMILY F-box domain 286 322 IPR036047 GO:0005515
Prci7g1035 1396 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 736 903 IPR014001 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1035 771 1326 RAD5 or RAD16-like Gene Family AT5G22750 24.958 1.55e-36 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Prci7g1035 SNF2_N 1.8e-94 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1035 - - pcin:129315314 2867.8