Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1001 ATGGAGGTTAAGCGTCGAACGGTTCGCTCCCTTGTGGGGAAGCTGAGCTCTGTTTCTGAGCAGCCCCAGCTCGATGCTCTCCGCCAGCTGCGCTTGATGACCAAGCAGGACGAAGAGGCCCGACCCGTGATCGTTGATTCGGGTGCGATTCCCTACTTGGCTGATAATCTCTTGTCGTCTTCGCACGATTTCCAAGAGAACGCCTCGGCGACGCTTCTCAACATCTCGATTTCCTGTAGAGAGTCCCTCATGTCCACACGCGGAGTCCTCGATGCCATCTCTCACTTGCTTACCCGCCATAACTTGACTTCGTCTGCTCCCGCTGTCCAATCCTGCGCCGCCACGTTGTACAGCCTCCTCATCGTCGATAACTATAGGCCTATCATTGGTTCCAAGCGTGACATTGTGTACGCGCTCGTGGATATTATCAAAACCCCCAATTCGCCGATCAGATCGATCAAGGACGCTCTCAAGGCTCTGTTTGGAATCGCTCTTCATCCGCTTAATCGGTGCACGATGATACAACTTGGTGCGGTTGAAGCTCTTTTCTCGTTGGTTCAGAAGGACCGGAAGGTCGGGATTGTGGAGGATGCGACGGCGGTGATTGCGCAAATCGCGGGCTGCGAAGAGAGCGAGGAAGCGTTTCAGAAGGTGTCGGGAATCGGTGTGCTGGTTGATCTTCTGGATATGGCGAGTAAGTCAAGCATGAAGACGAAGGAGAATGCTGTCTCTGGATTACTGAAGCTAGTGAGATGTGGAGGGGAGAAAGTAGCCATGGATGTGAGAATGAGAGCTTTAGGGGCATTCGATGGAATTGCGGACGTGCAAGTGAACGGAAGCACCAAAGGGAAGAGCAAGGCGGCGGCGTTATCGGCGGAATTGATCGGAGATGGAAACCATTGGAATGCACAGAGGGATTCCCGGTTTGATTCCTCAACAAGTCAAGATTCATCATTTTCATTCAATTTCTCGACAGATTCATCAGAATTTGCTCAAGGTGTGTGA 1005 0.5214 MEVKRRTVRSLVGKLSSVSEQPQLDALRQLRLMTKQDEEARPVIVDSGAIPYLADNLLSSSHDFQENASATLLNISISCRESLMSTRGVLDAISHLLTRHNLTSSAPAVQSCAATLYSLLIVDNYRPIIGSKRDIVYALVDIIKTPNSPIRSIKDALKALFGIALHPLNRCTMIQLGAVEALFSLVQKDRKVGIVEDATAVIAQIAGCEESEEAFQKVSGIGVLVDLLDMASKSSMKTKENAVSGLLKLVRCGGEKVAMDVRMRALGAFDGIADVQVNGSTKGKSKAAALSAELIGDGNHWNAQRDSRFDSSTSQDSSFSFNFSTDSSEFAQGV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1001 334 MobiDBLite consensus disorder prediction 303 334 - -
Prci7g1001 334 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Prci7g1001 334 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 220 IPR000225 GO:0005515
Prci7g1001 334 Gene3D - 2 292 IPR011989 -
Prci7g1001 334 FunFam ARM repeat superfamily protein 2 299 - -
Prci7g1001 334 SUPERFAMILY ARM repeat 6 273 IPR016024 -
Prci7g1001 334 SMART arm_5 208 251 IPR000225 GO:0005515
Prci7g1001 334 SMART arm_5 166 207 IPR000225 GO:0005515
Prci7g1001 334 SMART arm_5 37 77 IPR000225 GO:0005515
Prci7g1001 334 PANTHER U BOX DOMAIN-CONTAINING 7 295 - -
Prci7g1001 334 MobiDBLite consensus disorder prediction 305 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1001 Prci-Chr7 26962942 26964456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1001 8 305 U-box Gene Family AT2G23140 32.776 4.62e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1001 - - pcin:129316132 595.504