Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0997 ATGGCACCAAGAAAAGGCCATTTGATCAGAGAACTTCATGCTTTCAAGGAGACGTGGATCATTGTTGTAAGGGTTGTAAGGAAATGGAATGTTACTCCTAAAAACAAGCCTTTAGAGGTATTTTGTATCAACATGATTCTCATTGATGAAGAGGGTGAGAGGATACAAGCAAGTGTTACACAAAAGCCTCTTCTTGAACGTTTCAGAGATAGGGCTGTTGAGGGAAGTACTGTATTCATAGCCAATTTCAATGTAGTAGAGAATAACCAGTACAAAGCAACAAATCACACTTACAAGATCATTTTTAATGCAAACACTTTCATAGATGAAGAGAAAGCAAACATACCATGGAACTCTTTCTCTTTTATGCCTATTAGTGTTTGCCTTGAGCAAGAGATTGCACCTGAATACTTGATTGATGTTATTGGAGTGTTAAAGTCCATAGGAAAGCTTGAAGAGTACAGGACCGAAAATGGATTCCAAAACAAGCTGACTTTAACATTGGCAGATCAAAATGGCACAAGTATTATATGTGTGCTTCTTGGAGAGTGTGCCTCAAATACCTATTATAGCTATCTTGACAATGAAAGGTTTCCATTAGTGTTTGTCATTCAACTGTGCCGACTTACTATAGACAACAAGGAGGTCCAAATTGGTTCATCCTTCAATGCAACAAAAGTGTGGATGAATCCAAATATTAAGGAAGTTTCAGATTTGATCGACAGTGCCAAGGAAAGCTCATCTCCAAACAACTCTTGCTTCAGCCAAGTTATACCAATTCAAACTACACAACTCTCTGCAGACTCTATGTTGAGATCCACTAAGAAGATTATGATTTCTGACATCGACACAATGAAAGTGGGTGATCCATTTATTATAGAGTGTGTAATAGAGAAATTAGAGACTAATCCAGGCTGGACATATGAGGGTTGTATCAGATGTGGAACCAAACATAGGCCTAATTCAAAAGGAATTATGGTTTGCCCTTCATGCCCCAATGATATGACTCAAACTGAATTTAAGCTCAAAGCACACTATAACGTGTCTGATGAATCTGGAAATACCTCTGTTGTCTTTTTTGACAAGCATGCGTATGAGTTCACTCTAAAAACTGCTTCTGAGATAAAAGAGCAGCTGCATAAAGAAAATCGTTCATATGCCTTCCCAGATGAGCTTGAAGATGTGGTAGGGAGAAAAATGCTGCTCAAGCTAAAGCGTACAAGCTACAATCTTGAACATCCTAACTCTAGCATTGGTGTGGTTCAATACACAGCATGTCAAGACCTTCTTGAGCAATTTAAAGAGGCTTCAGTAGAGGTGGTTCCAACAGCCTCAGACTTTAAGAATAGTCATGAAGAAACAACTATGGGTTCATCTCTTTCCAAAGTTGAACCAATAATGTCTCAGGACATTGGGCTTGATGAAATGACTATATCTCAGCTGTATCCTCCTCCATTGCCAAAAGGAAAGAGGAAGCAATATTTGAAAAAGAGTGCAGAAGTCCAGTAA 1509 0.3857 MAPRKGHLIRELHAFKETWIIVVRVVRKWNVTPKNKPLEVFCINMILIDEEGERIQASVTQKPLLERFRDRAVEGSTVFIANFNVVENNQYKATNHTYKIIFNANTFIDEEKANIPWNSFSFMPISVCLEQEIAPEYLIDVIGVLKSIGKLEEYRTENGFQNKLTLTLADQNGTSIICVLLGECASNTYYSYLDNERFPLVFVIQLCRLTIDNKEVQIGSSFNATKVWMNPNIKEVSDLIDSAKESSSPNNSCFSQVIPIQTTQLSADSMLRSTKKIMISDIDTMKVGDPFIIECVIEKLETNPGWTYEGCIRCGTKHRPNSKGIMVCPSCPNDMTQTEFKLKAHYNVSDESGNTSVVFFDKHAYEFTLKTASEIKEQLHKENRSYAFPDELEDVVGRKMLLKLKRTSYNLEHPNSSIGVVQYTACQDLLEQFKEASVEVVPTASDFKNSHEETTMGSSLSKVEPIMSQDIGLDEMTISQLYPPPLPKGKRKQYLKKSAEVQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0997 502 Gene3D - 113 251 IPR012340 -
Prci7g0997 502 CDD RPA1_DBD_A_like 21 108 - -
Prci7g0997 502 PANTHER OS03G0429900 PROTEIN 7 446 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Prci7g0997 502 Pfam Replication factor-A C terminal domain 291 410 IPR013955 -
Prci7g0997 502 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Prci7g0997 502 MobiDBLite consensus disorder prediction 482 502 - -
Prci7g0997 502 Gene3D - 261 435 IPR012340 -
Prci7g0997 502 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Prci7g0997 502 SUPERFAMILY Nucleic acid-binding proteins 277 410 IPR012340 -
Prci7g0997 502 CDD RPA1_DBD_B_like 140 242 - -
Prci7g0997 502 Gene3D - 4 110 IPR012340 -
Prci7g0997 502 Pfam Domain of unknown function DUF223 45 138 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0997 Prci-Chr7 26956666 26959250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0997 4 412 Core DNA Replication Machinery Family AT5G08020 24.942 1.01e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0997 - - pcin:129300509 988.023