Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0995 ATGGGTGAGGCTGGGGAAGCAGAAGAGAGGCCTAATTTCAGAGATATTAGACGCTATTTCTGTGAATACTGTGGCATCTGCAGGTCCAAGAAGACCTTAATAACCGCTCATATCAATACCCACCATAAGGAGGAGGTGGAGAAAGCCAGAGTTAATACAGGTTCCGAAGTAGAGGATGTTAAATCCAACAATTGCAAGGAATGTGGCGCTAGTTTTAAAAAGCATGCCTATTTAATACAGCACATGCAAAGCCATTCACTTGAGAGGCCATATGTGTGTTCCATTGAGGATTGTCAGGCAAGTTACAGAAGAAAGGACCATTTGACTCGCCACTTTCTTCAACATCAAGGGCAAACTTTTAAGTGTCCAATTGAGAGTTGCAACCGTGATTTTGCTTTCCAAGGAAATATGACAAGACATGTTAAGGAATTTCATAATGAAAACTCTACCTCTACCACTGTTGAAAATCCGAAGCAGTATGTTTGCCCAGAAGTTGGTTGCGGCAAGGTTTTCAAATTTGCATCAAAACTGAAAAAGCATGAAAATTCTCATGTGAAGCTGGAGTCAGTAGAGGTAGTCTGCTTGTATCCCGATTGTATGAAGCATTTCACCAATGAGCACTGCCTTCAAGAACATATCAAATTGTGCCACCAACACGTGACCTGTGAGATCTGTGGGAAAAAGCAGCTGAGGAAAAATATTAAGCGGCATCTTCATATGCATGACACGTGTAGTTCGTCAGAGGCATTTAAATGTGAATATGAAGATTGTGATTGCACATTCTCAAGTAAATCTAATCTCCAGAAGCATGTGAAGGCTGTGCACTTTGAGGAGAAACCTTTTGTGTGTGGCTTTCCTGGTTGTGGCATGAGATTTTCTTACAAACATGTGAGAGATAACCATGAAAAAACTGGGTCTCATGTCTATAGCATGGGGGATTTTGAAGAAGCTGATGAGCAGTTCAGATCAAGGCCTAGAGGAGGACGAAAGAGAACGTATCCTACTGTTGAAATGTTAGTTAGGAAGAGAGTTACTCCGCCCAGTCAATTGGATCACTGGTTACTCATGCAAGATGATGATTAG 1083 0.4164 MGEAGEAEERPNFRDIRRYFCEYCGICRSKKTLITAHINTHHKEEVEKARVNTGSEVEDVKSNNCKECGASFKKHAYLIQHMQSHSLERPYVCSIEDCQASYRRKDHLTRHFLQHQGQTFKCPIESCNRDFAFQGNMTRHVKEFHNENSTSTTVENPKQYVCPEVGCGKVFKFASKLKKHENSHVKLESVEVVCLYPDCMKHFTNEHCLQEHIKLCHQHVTCEICGKKQLRKNIKRHLHMHDTCSSSEAFKCEYEDCDCTFSSKSNLQKHVKAVHFEEKPFVCGFPGCGMRFSYKHVRDNHEKTGSHVYSMGDFEEADEQFRSRPRGGRKRTYPTVEMLVRKRVTPPSQLDHWLLMQDDD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0995 360 Gene3D Classic Zinc Finger 91 115 - -
Prci7g0995 360 Gene3D Classic Zinc Finger 154 185 - -
Prci7g0995 360 SMART c2h2final6 19 41 IPR013087 -
Prci7g0995 360 SMART c2h2final6 63 85 IPR013087 -
Prci7g0995 360 SMART c2h2final6 220 241 IPR013087 -
Prci7g0995 360 SMART c2h2final6 91 115 IPR013087 -
Prci7g0995 360 SMART c2h2final6 120 145 IPR013087 -
Prci7g0995 360 SMART c2h2final6 250 275 IPR013087 -
Prci7g0995 360 SMART c2h2final6 192 217 IPR013087 -
Prci7g0995 360 SMART c2h2final6 281 307 IPR013087 -
Prci7g0995 360 SMART c2h2final6 160 184 IPR013087 -
Prci7g0995 360 SUPERFAMILY beta-beta-alpha zinc fingers 157 186 IPR036236 -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 93 115 IPR013087 -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Prci7g0995 360 Pfam Zinc finger, C2H2 type 91 115 IPR013087 -
Prci7g0995 360 Pfam Zinc finger, C2H2 type 250 275 IPR013087 -
Prci7g0995 360 Pfam Zinc finger, C2H2 type 65 85 IPR013087 -
Prci7g0995 360 Pfam Zinc finger, C2H2 type 160 184 IPR013087 -
Prci7g0995 360 SUPERFAMILY beta-beta-alpha zinc fingers 119 146 IPR036236 -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 120 IPR013087 -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Prci7g0995 360 Gene3D Classic Zinc Finger 279 304 - -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 122 145 IPR013087 -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 150 IPR013087 -
Prci7g0995 360 SUPERFAMILY beta-beta-alpha zinc fingers 234 285 IPR036236 -
Prci7g0995 360 Gene3D Classic Zinc Finger 6 90 - -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 250 280 IPR013087 -
Prci7g0995 360 Gene3D Classic Zinc Finger 116 153 - -
Prci7g0995 360 Gene3D Classic Zinc Finger 223 278 - -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 194 217 IPR013087 -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 162 184 IPR013087 -
Prci7g0995 360 SUPERFAMILY beta-beta-alpha zinc fingers 63 115 IPR036236 -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 252 275 IPR013087 -
Prci7g0995 360 ProSitePatterns Zinc finger C2H2 type domain signature. 283 307 IPR013087 -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Prci7g0995 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 189 IPR013087 -
Prci7g0995 360 PANTHER ZINC FINGER PROTEIN 4 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0995 Prci-Chr7 26888031 26891214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0995 87 310 C2H2 Transcription Factor Family AT1G72050 50.000 5.26e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g0995 zf-C2H2 0.00015 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0995 K09191 - qsa:O6P43_001489 570.081