Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0965 ATGAGGATCAACCGCAAACCTTTACACATTGCTGATTACCCAGTTGGAATCGAATCTCGAGTGCAGCAAGTCCAATCTCTTTTGGATGTTAACTCTAATGAGGGAGTCCAAATGGTAGGGATTTGGGGCACTGGAGGAATAGGCAAATCAACAATTGCTCGAGCAGTATGCAATTCAATTGCTGACCTATTTGAAGGCTTCTGTTTTCTTGCTAATGTTAGAGAAAACTCACAAAAGCGTGGGTTAGCGCATCTCCAAGAAATGCTTCTTTCTGAATTGATGATGGATGAAAATATCACTGTAAGATATGTCAATAAAGGAATTCCAATAATAAAACACAAGCTCCACAGAAAGAAGGTTCTTATAGTTCTTGATGATGTTGATGAGCTAGAGCAATTGCAAGCGATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGCAGAATCATTATAACAACAAGGGATAAGCATTTGCTAGCAAGACATGGTGTTGATAGAATTCATGAAGTTGAGAGTTTAAATCAAGAAGAAGCTCTTGAACTGCTCACTTGGAATGCCTTTAAACAAAATAGAGCCGAGCAAAGATACTTGGATAATTTAAATAATATTATATTATATGCCTCTGGTCTTCCATTGGCTTTGGAAATTATAGGTTCCAGCTTGTTTGGTATGGGAGTAGAATATTGGAATTCTGCACTAGAAAACTGGCGAGTAACTCCCAATCAAAAGATCCAACAAGTACTCAAAATAAGTTATGATGCTTTGGAAGAATATGAGCAGGAAATTTTTCTTGATATTGCTTGTTGCTTTAAAGGAGACACATTGGAATATGTCACAAGCACTCTACTGGCTTCTCATGGTAGATGCCCAAAATATGCTATTAAGGTGTTAGTTGATAGGTGTCTCATAAAGATTTGTCGTGAGGATAAATTAAGCCTTAGGCCTTCCGATAGCATTGTGACAATGCATGACTTGATTCAGGATATGGGGAAGGAAATTGTTCGGCACCAATCACCAAATGACCCTGGAAAACGCTCTAGGTTGTGGTTCACCAAAGACATTGTTTCCGTTTTAGAAGAGAACGAGGGAACTAAGAAGATTGAAGTCATAAATCTGCACATGCTGGAAGATGAAGAGGTTGATTGGGATGGAATGGCCTTCAAAAAGATGTCAAACCTTAAGATGCTTATCATTAGAAATGCACAATTTTCCACAGCTCCCAAGTATCTCCCAAGTAGTTTAAGAGTGCTGGAATGGAAGGGATATCCTTATTCATCTCTACCTTGTGATTTCAATCCCAAGCAACTAGTTATCTTAAGGGTGCCTGAAAGTCGCCTGACACTGAATACACCACTCAAGAAGTTCCGGTCTTTAACTATCATGAATTTGAGTCGCTGTGAATTGTTAAGAGAAGTTCCTGACTTATCTGAAGCGCCAAATTTGATTGAACTATGCTTGGATGGCTGCATAAATTTAACTAATGTTCATGCTTCCGTTGGTTCTCTTGATAAACTTAAGAGGTTAAGTGCTTATTATTGCAAGAAGCTCAAGAACTTTCCAAGCATCTTTTTGAGGTCTCTTGAATTTCTTGACCTCTCAGAGTGCGAGAGCCTTCAGACATTTCCAGAAATATTAGGAACCATGGAAAATTTAAGAGAAATGAATCTAACACACAGTGGCATAGAAATATTGCCATTGTCAATCAAAAACCTCATTGGTTTAAAAGAATTACATCTTACAAGGAAGTTGCGGCATCGGGGGGTTAAAGTAGATGAGATTTCATACTCATATTTGAATTCTGTGTCTCTGAACATATTACTCAGTCAGGCATCTCACGAGGTTGATGGCTTCAAGTTTATAATAAGAGGAGACAGACCTCCAAAATGGTTTGACCATTATGCTCTTGGAGATTCAGTGTCTTTCTGGTTCCGAAGAAAGCAACTTCCCAACGTGGCTGTGTGTTTTGCAGTATCGGCAACTAGAGATGCACGTCACGCCCCATATATTATACTAATTTTTAATGTCCAAATCAATGGCAAATCTTTTGACTCTCTTGCAAGATTTGATCAAGATATTGCATTTCAAAACTTCTATTTGATGGATTTGCAAAACCTGATTCCTATGGATGAGCTCAGTAATGGAGTTTTGCAAGATGAATGGAACCATGTGAAGGTTTCTTGCAACATGTTTTCCATTGCTTGTGGAATTGGTATGCGACCTCCACCAGATGATGCTGTCTATACAAGATGGAGTGGAATATATGTGCACAAGCAGGGATCTAGAATGGAAGATATCAGATTCACGAATCCTAATGTGGAATCTTTTTTCGCTGAGTTCTTGGAAGGATCTTCGTCAAATCCCAATACCATGGAGGAATTAATCCGACATTGGACGAATTTGTTCGTGCAGGGAAGAAGCTTAGACGAATTTAATGATGAATTTAGTAATTATGGACGCATGGTGTAA 2466 0.3881 MRINRKPLHIADYPVGIESRVQQVQSLLDVNSNEGVQMVGIWGTGGIGKSTIARAVCNSIADLFEGFCFLANVRENSQKRGLAHLQEMLLSELMMDENITVRYVNKGIPIIKHKLHRKKVLIVLDDVDELEQLQAIAGGLDWFGSGSRIIITTRDKHLLARHGVDRIHEVESLNQEEALELLTWNAFKQNRAEQRYLDNLNNIILYASGLPLALEIIGSSLFGMGVEYWNSALENWRVTPNQKIQQVLKISYDALEEYEQEIFLDIACCFKGDTLEYVTSTLLASHGRCPKYAIKVLVDRCLIKICREDKLSLRPSDSIVTMHDLIQDMGKEIVRHQSPNDPGKRSRLWFTKDIVSVLEENEGTKKIEVINLHMLEDEEVDWDGMAFKKMSNLKMLIIRNAQFSTAPKYLPSSLRVLEWKGYPYSSLPCDFNPKQLVILRVPESRLTLNTPLKKFRSLTIMNLSRCELLREVPDLSEAPNLIELCLDGCINLTNVHASVGSLDKLKRLSAYYCKKLKNFPSIFLRSLEFLDLSECESLQTFPEILGTMENLREMNLTHSGIEILPLSIKNLIGLKELHLTRKLRHRGVKVDEISYSYLNSVSLNILLSQASHEVDGFKFIIRGDRPPKWFDHYALGDSVSFWFRRKQLPNVAVCFAVSATRDARHAPYIILIFNVQINGKSFDSLARFDQDIAFQNFYLMDLQNLIPMDELSNGVLQDEWNHVKVSCNMFSIACGIGMRPPPDDAVYTRWSGIYVHKQGSRMEDIRFTNPNVESFFAEFLEGSSSNPNTMEELIRHWTNLFVQGRSLDEFNDEFSNYGRMV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0965 821 Gene3D - 172 256 IPR042197 -
Prci7g0965 821 SUPERFAMILY "Winged helix" DNA-binding domain 243 359 IPR036390 -
Prci7g0965 821 SMART AAA_5 35 174 IPR003593 GO:0016887
Prci7g0965 821 PRINTS Disease resistance protein signature 114 128 - -
Prci7g0965 821 PRINTS Disease resistance protein signature 207 221 - -
Prci7g0965 821 PRINTS Disease resistance protein signature 38 53 - -
Prci7g0965 821 PRINTS Disease resistance protein signature 522 538 - -
Prci7g0965 821 Pfam NB-ARC domain 18 242 IPR002182 GO:0043531
Prci7g0965 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 266 IPR027417 -
Prci7g0965 821 Gene3D Ribonuclease Inhibitor 524 600 IPR032675 -
Prci7g0965 821 Gene3D Ribonuclease Inhibitor 383 523 IPR032675 -
Prci7g0965 821 Gene3D - 4 166 IPR027417 -
Prci7g0965 821 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 580 IPR044974 GO:0006952
Prci7g0965 821 Coils Coil 241 261 - -
Prci7g0965 821 SUPERFAMILY L domain-like 339 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0965 Prci-Chr7 26612848 26619513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0965 434 614 WRKY Transcription Factor Family AT4G12020 34.043 1.67e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0965 - - pcin:129295008 1539.63