Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0890 ATGATGACGTCCTTTCCGTCCAAAAACCTATGGATTCCACGGCAACAATGCCCATGTGGAGATTGGAAATGTTATGTGACATATGAGGGTGATGGTGAAGAGATTGCGGCTGGACCGGAATTGGTGAAGACAGAGAAGGCGTCATCAGAAACTATGGTTTCACCCTATGTAGGAATGGTGTTTAAGAGTGATGATGATGCGTTTGAATATTATGGGAATTTTGCCCGGAAGAATGGGTTCTCAATTAGAAAAGAAAGATCCAGACTTAGCCCGCAATTAGGCATTTATAAACGTGACTTTGTTTGTTACCGTTCAGGGTTTGCCCCAATGAAGAAGAAGTCTAATGGAGAACACCATAGAGATAGAAAATCCGTACGGTGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTGGATGGAGCTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAGGATGACCAAGTGCGGCTTCTTCCAGCATATCGGAAAATACAAGAGGCTGATCAAGAGCGTATACTCTTACTTTCTAAAGCTGGGTTCCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCATTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTTATTCAGGAAAACGAGGCATTGCTAAGCGAGAAAAGAGAAAATGATGTATTGGAACTTCTTGAGGCATGCAAAACAATGAAAGAGACTGACAATGATTTTGTTTATGATTTTACAATGGATGGGAATGAAATGGTTGAAAATATAGCCTGGTCTTACAGTGACTCTGTTCGTGCATATTCTATGTTTGGTGATGTGGTTTATTTTGACGCTACGTATCGATCAATCACATACGGAATGCTCTTTGGAGCATGGTTTGGTATTGACAACTGTGGTAGAACCATTTTCTTTGGTTGTGTTTTGTTGCAGGATGAAACACCTCGGTCCTTCTCTTGGGCACTACAGAGTTTTGTCCGGCTCATGAGAGGAAGATGTCCACAAACAATTTTAACCAATGTCGACCCTGGCCTTAGAGATGCCATAAGAAGTGAATTGCCAGGCACTAAACATGTAATCTCTATATGGTGTATGATGCCCAAGGTAACCTGCTGGTTTTCTCTTCCTCTTGGGTCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATTCAGAGGAATTTGAACTTCGATGGAACCAAATGACATCTTCCTTTGGTCTTGGTTCAGATAGGCATATTGGTCTACTCTACACTTTGCGGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTCTGGCTCGGATGGGGACAGCATCTTACTCAAAGTCATTAGACAGTTTTTTGAAAGGCATCTTCAGTTCTCAAACTTGTTTACGGAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATTTTCTTCATCATGCTCGTCAAGAAACTCCATATATGCACCTCAAAAGCTGCATACCTATTGAAGAGCATGCCCGGAGAATATACACACCTTTTTCATTTAATGCCTTGCAACAAGAGTTATTGCTAACAATGCAATATACTACATCTGAAATGTCCAATGGATCATATATTGTACGCCACTTCAAAAGGATGGATGGTGAGCGTCTTGTGATATGGCTGGCTGAAGATGAACAAATCCATTGCTCTTGCAAAGAATTTGAATCCTCTGGGATATTGTGCAGACATGCTCTTCGTGTATTCATAATAAAGAATTACTTTCAGCTCCCTGATAGGTATTATTTAAGTAGATGGCGACAACATGAGTCCTCTCTACTTCTTGATAATGATCACAATAATAATCAAAGTATCGAGGATGAATGGTTTCAAGAATATCAGTCCCTTGCTGAAACCTTGTTTGCAGAATCTTCAATTACAAAGGAGCGATCTGACTTTGTACGTAGAGAACTGACAAAAGAAATTACTAGGATTCTTAGCGAGGTTAGAAATCTGCCTCATAATGATGGAGTCACAATGGACTTGACTATTTCCCCAAACGTTTAG 2085 0.4034 MMTSFPSKNLWIPRQQCPCGDWKCYVTYEGDGEEIAAGPELVKTEKASSETMVSPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPMKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGASHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVIQENEALLSEKRENDVLELLEACKTMKETDNDFVYDFTMDGNEMVENIAWSYSDSVRAYSMFGDVVYFDATYRSITYGMLFGAWFGIDNCGRTIFFGCVLLQDETPRSFSWALQSFVRLMRGRCPQTILTNVDPGLRDAIRSELPGTKHVISIWCMMPKVTCWFSLPLGSRYEEFKSEFDALYHIENSEEFELRWNQMTSSFGLGSDRHIGLLYTLRASWALSYVRGFFLARMGTASYSKSLDSFLKGIFSSQTCLRSFFEQVGISANFLHHARQETPYMHLKSCIPIEEHARRIYTPFSFNALQQELLLTMQYTTSEMSNGSYIVRHFKRMDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFIIKNYFQLPDRYYLSRWRQHESSLLLDNDHNNNQSIEDEWFQEYQSLAETLFAESSITKERSDFVRRELTKEITRILSEVRNLPHNDGVTMDLTISPNV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0890 694 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Prci7g0890 694 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Prci7g0890 694 Pfam MULE transposase domain 292 384 IPR018289 -
Prci7g0890 694 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 643 IPR031052 GO:0006355
Prci7g0890 694 SMART 26again6 574 601 IPR006564 GO:0008270
Prci7g0890 694 Pfam SWIM zinc finger 571 596 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0890 Prci-Chr7 26006379 26009305 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci7g0890 MULE 5.8e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0890 - - gmx:100817107 1169.45