Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0859 ATGTCCCCAGCCCCAATGTCCCGTCTCAGTACTCTTCTCTTCTTCCTCTTCCTTCCGTTATTCCTCCTCGCTCAACCTCCTCCTCCACCTCCATCTCCTTCTTCTTCTCCTTCTCCTTCTGCTCTCTGCAAGTTCACACTGTACCCCAAACTCTGTCGTTCCATGCTCTCCATCATCTCCTCCTCTCCCTCCGATCCCTACAACGCCGGCAAATTCTCCATCAAACAGAGCCTCAAGCAAGCCAAGAAGCTCCTCAAGGTCTTCGACGACTTCCTTGTCAGCAGCCGCCGCCGCCGCTCCGACTCTGTCGAAGTTCGCGCCCTCGACGACTGCCGGGACCTCATCCTCCTCAACCTCGACTACCTGGAGGCCGTCGCGGCCGACCTCCACGCGAACTCGGCGGTCTCCGCCGAGCTGACGGATAAGGTGGAGAGCTACCTGAGCGCGGTGGCGACGAACCATTACACTTGCTACGACGGGCTGGTGGCGGCGAAAAGTAAAATCGGGGAGGTTCTGGCGGTGGCGATGAGGAATGTGACGGAGGTGTATAGTGTGTCGCTTGGGTTAGTGAGTGAGGCTTTGAATGAGAATGTGAAGAACAAGTTCCAGACTCGCAAGCATGGACTTCCTTCTCAGTCTTACAAAGTCAGGGAGCCTCTCGAGAAGCTCATCAAGGTTCTGCATGAAAAATACAGTTGCAAGGCAAGATCAAACTGCACAAGCAGAAGTGAAAGGATTCCTATGAGAGAAAGTGAAAGCAAAGGGATTCTATTAAATGGGTATGCAACTGTGAGCCATTATGGGACTGATAACTTCACCTCCATTGGACAAGCCATTGATGCTGCACCTGCTGACCTCAAACCAGAAGATGGCTACTTCCTTATCTATGTCAGACAAGGATACTATGAAGAATATGTAATTGTTCCAAAACACAAGAAGAATATCTTGCTCATTGGTGATGGTATCAACCAGACTATTATCACAGGCAATCACAGTGTCATTGATAGTTGGACCACCTTCAATTCTTCCACCTTTGCTGTTTCTGGAGAAAGATTTATAGCAGTGGATATCACATTCAGGAACACAGCTGGTCCAGAGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCTGATCTCTCAACCTTTTATCGATGCAGCTTTGAGGGATACCAAGACACCCTCTATGCTCACTCTCTGAGGCAATTCTACAGAGAATGTGAAATTTATGGCACAGTGGACTTCATATTTGGCAATGCAGCTGTTGTGTTCCAAGGCTGCAAGATCTATGCCAGAAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAAGGCAGAACCGACCCTTTTCAGAACACTGGAATCTCAATCCAGAATTGTAGCATTGAAGCAGCACAGGATTTGTCTTCAGATTTGAACTCTACTACTGTCTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTCTATATGGAGTCTTATATTGGGAATGTGATTGAACCTTCTGGTTGGTTAGAGTGGAATGGGACTGTAGGGTTGGACACGTTGTTTTTTGGTGAGTTCAATAACTATGGACCGAAGGCTAATACTAGCAATAGGGTTCAATGGCCTGGTTTTAATCTTCTGAATGCTACTCAGGCTTTGAACTTTACTGTCCTGAATTTTACTCTGGGAGATACTTGGCTTCCTGACACAGATATACCTTATTCAGGAGGATTACTAGATCATTAG 1740 0.477 MSPAPMSRLSTLLFFLFLPLFLLAQPPPPPPSPSSSPSPSALCKFTLYPKLCRSMLSIISSSPSDPYNAGKFSIKQSLKQAKKLLKVFDDFLVSSRRRRSDSVEVRALDDCRDLILLNLDYLEAVAADLHANSAVSAELTDKVESYLSAVATNHYTCYDGLVAAKSKIGEVLAVAMRNVTEVYSVSLGLVSEALNENVKNKFQTRKHGLPSQSYKVREPLEKLIKVLHEKYSCKARSNCTSRSERIPMRESESKGILLNGYATVSHYGTDNFTSIGQAIDAAPADLKPEDGYFLIYVRQGYYEEYVIVPKHKKNILLIGDGINQTIITGNHSVIDSWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKIYARKPLPFQKNAITAQGRTDPFQNTGISIQNCSIEAAQDLSSDLNSTTVLTYLGRPWKLYSRTVYMESYIGNVIEPSGWLEWNGTVGLDTLFFGEFNNYGPKANTSNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSGGLLDH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0859 579 CDD PMEI-like_3 41 192 - -
Prci7g0859 579 Gene3D - 260 578 IPR012334 -
Prci7g0859 579 PANTHER PECTINESTERASE 22 566 - -
Prci7g0859 579 Pfam Pectinesterase 262 561 IPR000070 GO:0030599|GO:0042545
Prci7g0859 579 FunFam Pectinesterase 257 576 - -
Prci7g0859 579 NCBIfam pectinesterase inhibitor domain 11 190 IPR006501 GO:0004857
Prci7g0859 579 Pfam Plant invertase/pectin methylesterase inhibitor 40 188 IPR006501 GO:0004857
Prci7g0859 579 SUPERFAMILY Pectin lyase-like 259 575 IPR011050 -
Prci7g0859 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 193 IPR035513 -
Prci7g0859 579 SMART PMEI_2 34 189 IPR006501 GO:0004857
Prci7g0859 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 191 IPR035513 -
Prci7g0859 579 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0859 Prci-Chr7 25780575 25786883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0859 43 577 Carbohydrate Esterase AT3G10720 58.178 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0859 K01051 - gmx:100816503 804.283