Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0852 ATGGACATAGATCTTAGGTTACCTTCTGGTGATCACGATAAGGATGAAGAACAAAATACAATTGCTGGCTTATTGGAACACGAAGAAAAATTGCATAATGGAGATCTAGAAGGCCAGAATATTGTTGGTGCTAGTGTTGATGTAGATGCTGGAGATTTGAATTCATCCACAGTGGATTTTGCATTATTTAAGGAAGATACAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCAAGGTCAATGGGATTTAATACAGCAATACAAAATAGTCGCCGATCAAAAACATCAAGAGAATTTATAGATGCAAAATTTGCTTGTTCCAGGTATGGAACAAAAAGAGAGCATGACAAATCATTCAATCGACCACGTGCCAGACAGAACAACCAAGATACTGAAAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCTGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAGCATAATCACGAGCTTTTACCAGCTCAAGCTGTCAGTGAGCAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTGAAGAGCGAGAGAAATCCATTTGACAAAGGTCGTAATTTGGGCCTGGAGTCAGGGGATGCCAAACTTCTACTTGATTTTTTGGTGCAGATGCATAGTATGAATTCAAACTTCTTCTATGCAGTAGACATTGGTGAGGATCAACGACTGAAAAATCTTTTATGGGTTGATGCTAAAAGTAGGCATGACTATATGAACTTTTGTGATGTAGTTTCTTTTGACACCATCTATATTAGAAACAAATATAAGTTGCCTCTTGCACTTTTTGTTGGAGTAAACCAGCACTATCAATTTATACTGCTTGGGTGTGCCTTAATATCAGATGAAAGTGCTGCTACTTATTCTTGGCTAATGCAGACGTGGTTAAAAGCAGTTGGTGGCCAGGCTCCAAAAGTGATAATCATTGCCCATGACAAGACATTGAAGTCAGTTATTTTGGATGTCTTTCCTAATTCTCACCACTCTGTGTGCTTATGGCATGTATTAGGGAAGGTATCTGAAAATTTGGCTCATGTAATTAAGCGACATGAGAATTTTATGGCAAAATTTGAGAAATGCATCTATAGGTCGTGGACAACTGATGAGTTTGAGAAGAGGTGGTCGAAAATTGTTGATAGGTTTGAACTCCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGCAAATTATGGGTGCCAACATTCATGAGGGATATTTTCTTGGGTGGTTTGTCTACTGTCCAGCGATCAGAAAGTGTGAATTCCTTCTTTGATAAATATGTTCATAAAAAGACCTCTGCTCAAGATTTTGTCAAACAGTACGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCTGATTCCGAGATTTTGAATAAAGTGGCAACATTAAAAACTCCTTCGCCATTAGAGAAGAGTGTTGCAGGGAGTTACACACACGCAGTGTTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAACTGAAAGGCAGGATGATACAGGCATTACTTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCATTGTTGTGTGGAATGAAATTAAATCTGAAGTGTCATGCATATGTCGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCATTGATTGTTCTTCAATATTCTGGCTTTTCGGTAATCCCATCCCGATATATCTTAAAACGGTGGACAAGAGATGCAAAAGCTGGACAAACAACGGGAGAACAATCTGAACATATGCCAACCAGGGTGCAACGGTACAATGATTTATGTCAACAAGCAATAAAGTTGAGTGAAGAGGCGTCTCTATCTCAAGACAGTTATGGTATTGCATTCCTTGCATTGCGTGAAGCATACAAAAATTGTGTGAGTGTTAACAATTCTAGCAAGAGTCCTACAGAAGTTGTCATATCAGCTAGTCAAAGTCAGCTCTCCACTGAAGAAGATACCCAAAGTAAATCCATGGGCAAGGCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGCTGCACTCTGAGGCTGAAGTGATGACCGTTGGGGCACAAGATAACCTGCAACATATGGACAAATTCAGCAGCACAAGGGCGGTAACGCTTGATGGTTACTATGGCTCTCAACAGAGTGTTCAGGGGATGTTGAACTTGATGGGGCCAACTCGTGATAATTATTATGGAAATCAACAGACAATTCAGGGGCTGGGACAATTAAGTACCATACCAACGAGCCACGATGGTTACTATGGTTCACATCAAAGCATGCCTGGTCTGGTAAGGCACAGCTGGATTTTTTCCGAGCATCGACAAATTTCGCTTACAGCATTCGGGATGATCCAAATGTAA 2490 0.396 MDIDLRLPSGDHDKDEEQNTIAGLLEHEEKLHNGDLEGQNIVGASVDVDAGDLNSSTVDFALFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSFNRPRARQNNQDTENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKSERNPFDKGRNLGLESGDAKLLLDFLVQMHSMNSNFFYAVDIGEDQRLKNLLWVDAKSRHDYMNFCDVVSFDTIYIRNKYKLPLALFVGVNQHYQFILLGCALISDESAATYSWLMQTWLKAVGGQAPKVIIIAHDKTLKSVILDVFPNSHHSVCLWHVLGKVSENLAHVIKRHENFMAKFEKCIYRSWTTDEFEKRWSKIVDRFELREDECMQSLYEDRKLWVPTFMRDIFLGGLSTVQRSESVNSFFDKYVHKKTSAQDFVKQYEAILQDRYEEEAKADSEILNKVATLKTPSPLEKSVAGSYTHAVFKKIQVEVIGAVACHPKTERQDDTGITYKVHDMEKNQDFIVVWNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGFSVIPSRYILKRWTRDAKAGQTTGEQSEHMPTRVQRYNDLCQQAIKLSEEASLSQDSYGIAFLALREAYKNCVSVNNSSKSPTEVVISASQSQLSTEEDTQSKSMGKANKKKNPTKKKKLHSEAEVMTVGAQDNLQHMDKFSSTRAVTLDGYYGSQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSTIPTSHDGYYGSHQSMPGLVRHSWIFSEHRQISLTAFGMIQM 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0852 829 Pfam MULE transposase domain 284 376 IPR018289 -
Prci7g0852 829 MobiDBLite consensus disorder prediction 126 156 - -
Prci7g0852 829 Pfam FAR1 DNA-binding domain 85 187 IPR004330 -
Prci7g0852 829 SMART 26again6 575 602 IPR006564 GO:0008270
Prci7g0852 829 ProSiteProfiles Zinc finger SWIM-type profile. 553 600 IPR007527 GO:0008270
Prci7g0852 829 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 673 IPR031052 GO:0006355
Prci7g0852 829 Pfam SWIM zinc finger 569 598 IPR007527 GO:0008270
Prci7g0852 829 MobiDBLite consensus disorder prediction 686 723 - -
Prci7g0852 829 MobiDBLite consensus disorder prediction 686 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0852 Prci-Chr7 25718277 25725667 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci7g0852 FAR1 1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0852 - - gmx:100817034 1364.36