Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0842 ATGGCTTCTTCAAGTCCTAACATGGGAACTGATAAGCATGGATCACTGTCACCTCTTGGGCCTGCCATAAGTCTCCAAGTTGAATCAGAGAAAGCTTGCGTGCCTAAGAAGAAAACATCCGATGGAAAATTCTTACCTACGGGCAGACGTGGTTATGGATCCAAGGGCCAAAAGATTCAACTTCTGACTAACCATTTTAAAGTTAAACTAACCAATAAAGATGGCGGCTTCTATCACTACACTGTTGCTCTGTTTTATGAAGATGGACGCCCTGTGGAAGCTAAGGGGATTGGGAGAAGAGTGATAGACAAAGTTTATGAGACCTATGCTTCTGAGCTGCAAAGCAAGAACTTTGCTTATGATGGAGAAAAGTCCTTATTCACTCTCAGTTCACTCCCACATAACAAGCTTGAATTCAAGGTTGTGCTAGATGAAATTTCATCAAACAAGCTTGGAAAGAATGGAAGCGCTGACAACAACACAGAGGGAACTGATAAGAAGAGAATGAGGCGTCCATTTCAGTCCAAGACTTACAAGGTGGAGATCAGTTATGCTAAAAAAATCCCAATGCAAGCAATTGTAGATGCATCGAGTGGTCTAGAATCTGATCATCACCAAGAATCATTAAGGGTTCTGGACATCATATTAAGGCAGCGTGCAGCAAAGCAGGGCTGTCTGCTTGTGCGCCAATCATTCTTCCATAACAAAGTAGAAAATTACAGAGACATCGGAGGTGGTGTTCAAGGTTGTCGTGGTTTTCATTCGAGTTTCCGAGCCACTCAAGGAGGTTTGTCCTTAAATGTTGATGTGTCAACAACATTGCTTCTAAAACCTGGTCCAGTGTTGGACTTCCTCTGCATGAATCAAAATGTTAACCATCCTGGCTTAATTGATTGGACCAAGGCAAAAAGGATGTTGAAAAACCTGAGAATCAAGGCTAACAATATGGAGTACAAAATCACTGGATTGAGTGAAAGGCCCTGCAAAGATCAAACATTTTCCTTGAAGCAAGGAAGAGAAGCAAACGGTGAAGTCAAGTCAATTGAAATAACAGTTCGTGAATATTATGAACGCCATAAAAACATCAGATTGCTTCATTCAGCTAATTTGCCATGCATCAATGTTGGCAAACCAAAGAAGCCTACTTATTTTCCGTTAGAGCTCTGTACTTTGGTTTCATTGCAACGCTACACTAAGGCCCTTACCAGCTTGCAAAGAGCTTCAGTTGTGGAAGTGTCAAGGCAAAAGCCCCATGAACGAATGACATCTCTGACAAATTCACTAAGAAACAGCGGATATAATGACGACCCTATGTTTCGTTCTTCTGGAATTGATATTGGATCTCAGTTTACAAGAGCTGAAGGTCGTGTTCTACTAGCTCCAAAGCTTAGAGTTGGAAAGGGGGAAGAATTCTTGCCCAGAAATGGGAGGTGGAATTTCAACAATAAGCAACTTTTTCAACCTGTGGTGCTTGCACGTTGGGCTATAGTCAGCTTCTCAGCTCGTTGTAACATACGCCAACTTATTGAAGGCCTGAAAAGATGTGCACAGATGAAAGGGATGACCTTGTACGAACCAGTTGGAGTGTTTCAAGAGGATCAACGTATGAGTCGTAAACCAGCCAATGTCAGGGTTGAAGAATTGTATAAAATTGTGATGAATCAAATGCCTGGGTTGCCCCAATTTCTATTGTGCATCCTACCAGAGAGGAAGAATTCTGATATTTATGGTCCTTGGAAAAGAATAAATCTTGCAAAAGATGGAAAGGGAGAAGGGGTTGTTACACAATGCATTGCACCAACAAAAATGAATGACCAATACTTCACCAATGTTTTATTGAAGATTAATGCCAAGCTTGGTGGGATGAATTCCTTTTTGGCAATAGAGCATTCACAATCCATACCTATAGTTTCAAAAGTGCCTACCTTAATTCTTGGTATGGATGTCTCACATGGCTCTCCTGGTCGATCAGATGTGCCATCTATTGCTGCGGTTGTCAGCTCCCGGTATTGGCCTCAAGTTTCCCGTTATCGAGCATCAGTTCGTGCTCAGACACCAAAACTAGAGATAATTGCTAATTTGTTCAACCCTGTTTCTGATACTGAGGACCATGGCATTTTTAAGGAGTTGTTGGATGACTTTATTAATTCTTCAGGAATGCGGCCTGAACATATTGTCATATTCAGGGATGGAGTGAGTGAATCACAATTCAGTCAAGTATTGAACATTGAGTTGGATCAAATCATTCAGGCTTGCAAATGTTTTCAAGAAAGTTGGGATCCAAAATTTACTGTGATCATTGCCCAAAAAAATCATCATACTAAATTCTTCCAGCAGGTCAATGCCAGAGAAAATGTTCCACCAGGCACTGTTATTGATAATACAGTTTGTCACTCTAAGAACAATGATTTCTATATGTGTGCTCATGCTGGGATGATTGGAACAAGTCGGCCTACTCATTACCACGTGCTATGTGATGAGATTGGTTTCTCTGCTGACGAGTTGCAAGAATTCGTGCATTCTCTCTGTTATGTGTATCAGAGAAGCACCACAGCTATATCAGTTGTTGCTCCAATCTGCTATGCTCACTTAGCAGCAGCACAAGTGGCACAGTTCATCAAGTTTGATGAACTTTCAGAGTCGTCGTCTTCTTCATCTAGTAATCAATTTCATGAGTTACCTCGTCTTCATGATCGAGTCCGCAACTCAATGTTCTTCTGTTAG 2724 0.4137 MASSSPNMGTDKHGSLSPLGPAISLQVESEKACVPKKKTSDGKFLPTGRRGYGSKGQKIQLLTNHFKVKLTNKDGGFYHYTVALFYEDGRPVEAKGIGRRVIDKVYETYASELQSKNFAYDGEKSLFTLSSLPHNKLEFKVVLDEISSNKLGKNGSADNNTEGTDKKRMRRPFQSKTYKVEISYAKKIPMQAIVDASSGLESDHHQESLRVLDIILRQRAAKQGCLLVRQSFFHNKVENYRDIGGGVQGCRGFHSSFRATQGGLSLNVDVSTTLLLKPGPVLDFLCMNQNVNHPGLIDWTKAKRMLKNLRIKANNMEYKITGLSERPCKDQTFSLKQGREANGEVKSIEITVREYYERHKNIRLLHSANLPCINVGKPKKPTYFPLELCTLVSLQRYTKALTSLQRASVVEVSRQKPHERMTSLTNSLRNSGYNDDPMFRSSGIDIGSQFTRAEGRVLLAPKLRVGKGEEFLPRNGRWNFNNKQLFQPVVLARWAIVSFSARCNIRQLIEGLKRCAQMKGMTLYEPVGVFQEDQRMSRKPANVRVEELYKIVMNQMPGLPQFLLCILPERKNSDIYGPWKRINLAKDGKGEGVVTQCIAPTKMNDQYFTNVLLKINAKLGGMNSFLAIEHSQSIPIVSKVPTLILGMDVSHGSPGRSDVPSIAAVVSSRYWPQVSRYRASVRAQTPKLEIIANLFNPVSDTEDHGIFKELLDDFINSSGMRPEHIVIFRDGVSESQFSQVLNIELDQIIQACKCFQESWDPKFTVIIAQKNHHTKFFQQVNARENVPPGTVIDNTVCHSKNNDFYMCAHAGMIGTSRPTHYHVLCDEIGFSADELQEFVHSLCYVYQRSTTAISVVAPICYAHLAAAQVAQFIKFDELSESSSSSSSNQFHELPRLHDRVRNSMFFC 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0842 907 Coils Coil 306 326 - -
Prci7g0842 907 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g0842 907 ProSiteProfiles PAZ domain profile. 318 393 IPR003100 GO:0005515
Prci7g0842 907 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 876 - -
Prci7g0842 907 SUPERFAMILY PAZ domain 273 434 IPR036085 GO:0005515
Prci7g0842 907 Pfam Argonaute linker 1 domain 228 274 IPR014811 -
Prci7g0842 907 FunFam Protein argonaute 3 634 907 - -
Prci7g0842 907 CDD Piwi_ago-like 437 873 IPR045246 -
Prci7g0842 907 Gene3D - 633 907 IPR036397 GO:0003676
Prci7g0842 907 ProSiteProfiles Piwi domain profile. 562 874 IPR003165 GO:0003676
Prci7g0842 907 Pfam Piwi domain 563 874 IPR003165 GO:0003676
Prci7g0842 907 Gene3D - 457 627 - -
Prci7g0842 907 Pfam PAZ domain 282 409 IPR003100 GO:0005515
Prci7g0842 907 SUPERFAMILY Ribonuclease H-like 556 872 IPR012337 -
Prci7g0842 907 Gene3D paz domain 272 397 - -
Prci7g0842 907 Pfam N-terminal domain of argonaute 57 216 IPR032474 -
Prci7g0842 907 CDD PAZ_argonaute_like 278 392 - -
Prci7g0842 907 SMART DUF1785_2 226 278 IPR014811 -
Prci7g0842 907 SMART Piwi_a_2 562 874 IPR003165 GO:0003676
Prci7g0842 907 Pfam Argonaute linker 2 domain 419 464 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0842 Prci-Chr7 25678250 25688495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0842 41 907 Eukaryotic Initiation Factors Gene Family AT5G43810 33.991 3.31e-162 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0842 K11593 - pop:7486850 1196.8