Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0824 ATGGATGTTGAAGCAGTGGATGAAGGAGAAAGCAATGATAGACTTGAACCTGACAGAGGCCAGAGACAGAGTGTAACTGTAAATCTGCCTGAAAGAGAAGTAATTAATCATGGTGGTGATGCAGATATGAAACCACAAGTGGGCATGCTTTTTGAAACGGAAGATGCTGCAAGATCATTTTATGATGCATATGCAAGGCGAGAGGGTTTTAGCACCCATGTGGGTCAGTTCAGCCGTATGAACCCTGATGGACCAATTGTAACTTGGGACTTTTCTTGTACTAGGGAGGTATTTAAAAGGAAGAACATAGAAAGTTGCAATGCAATGCTTAGAATAGAGAGAAAAGATGCCAACAGCTGGATAGTCACAAAATTTGTTGAGGACCATAACCATTCCCTGGCCTCCCATAGTAAGGTGCACCACCTTCGACCTCATAGGCATTTTGCAGGTGCTACAAGGAATGCTTCTGAGACATTCAATGCTACTAGTGATGCCTATATCTCAACAGATGGAAATCATGTATTTCACGAACCAACTCGTGTAGTCAGGAGTTCCTCTCCAGTAGATCTAAATTATCGATCCAGAAACACTGGTCCTTTAATGTACATAAGACCCACTCGAAATAGGACCCTTGGAAGAGATGCTCAGAATCTTCTGAATTATTTTAAGAAGATGCAAGCAGAAAATCCTGGTTTTTATTATGCTATACAGCTTGATGATGAGAACCGCATGACCAATGTGTTTTGGGCTGATGCGAGGTCAAGAGCAGCCTATAACTACTTTGGTGATACTGTAGTTTTTGATACAATGTATAGACCAAATCAATACCAAGTCCCGTTTGCTCCATTTACAGGAATCAATCACCATGGTCAAATGGTTTTATTTGGTTGTGCATTGCTTTTGGATGAATCAGAGTCTTCCTTTACCTGGCTGTTCAAGACATGGCTTTCTGCTATGAATGATCGACCTCCTGTTTCAATAACCACAGACCAAGATAGAGCTATTCAAGTTGCCGTTGCCCACGCCTTTCCAGGGACTCGCCACTGTATTTGCAAGTGGCACATTTTGAGGGAAGGTCAAGAAAGATTGGCTCATGTTTACCTAGCCCATCCTTCCTTTTATGGAGAGCTGTATAGCTGCATCAATTTCTGTGAGACTGTTGAGGACTTTGAATCAACATGGAATACTCTGCTAGATAAATATGATCTTCAGAAAAATGAGTGGCTTCAGGCAGTGTTTAAGGCTCGCAAGCAGTGGGCCCCTGTTTATTTCCGTGGCACATTCTTTGCTGCACTTACTTCAAACTACAGGGTTAGCTCCTTTTTTGATGGCTATGTGAATCAGCAGACAAACTTACCTTTATTCTTTAAGCAGTATGAAAGAGCTCTTGAACAGTCATTGGAAAAAGAAATAGAAGCCGATTATGATACAATTTGCACCACGCCAGTATTGAAGACTCCATCACCAATGGAACAACAGGCTGCAAATCTATACACAAAGAAGATTTTTGCAAAGTTTCAAGAGGAACTGGTGGAAACTTTTGTGTATACTGCTGACAGTATTGAGAGTGATGGTGTGGTCAGTAAATACAGGGTTGCAAAATATGAACATGATCACAAGGCATACATGGTCACTTTAGATGCTTCTGAATTGAAAGCAAATTGCAGCTGTCAGATGTTTGAATACTCGGGTATTCTTTGCAGGCATATTTTGACTGTATTTACTGTCACAAATGTTCTTACCCTTCCGCCACACTACATATTGAAGCGATGGACAAGGAATGCTAAACTTAATATGCAATCAGATGACCAAATTTCAGATTCAAATGCCATTGAAACTCTCACCTTGCGTTTTAATAGTTTATGTCATGAAGCCATTAAACTTGCTGAAGAAGGAGCGGTAGCAGTGGAAACTTATAATGCTGCAATGAATGCTTTAAGAGAGGGCGGGAAAAAAGTTTCTGTTGTGAAAAAAAAAGTGGCAAAAGTCACACCTCCAACTCCAAATGCTCAGGGTAATGGAAGTAATCAGGAAGATCATAGCAAGAAGAGCCCTTTATCCATGTGGCAAGATCCAGTGTCACATTGCTTTAATCTTAATGACATTGGGCTTCCTGTTGCTGATCTTAATCAGCCGCGTATGGCTCCTGTTTCTATTTATCGCAATGGTGGTCCTTCTGATAACCCTGTTGTTCTTATATATTTCAAGTCTATGAGTTGGGTCATTGAAAATAAGAATTCAATCTCAACCACTAGAGCCGCTGTGATTAACTTGAAGCTGCAAGATTATGGCAAGAACCCTCCAGCAGAGAATGAAGTACAATTCCGGGTAACAAGGGTCACTTTGGAGCCTATGATGAGATCTATGGCTTATATCAATCAGCAACTCTCCACGCCAGTCAATAAAGTTGCTGTCATCAATCTGAAGCTCCAGGACACAAAGACAACTACTGGGGAAACAGAAGTGAAATTCCAAGTTTCCAGGGATACACTAGGTTCCATGCTTAAATCTATGGCCTACATCCGGGACCAACTATGA 2538 0.4117 MDVEAVDEGESNDRLEPDRGQRQSVTVNLPEREVINHGGDADMKPQVGMLFETEDAARSFYDAYARREGFSTHVGQFSRMNPDGPIVTWDFSCTREVFKRKNIESCNAMLRIERKDANSWIVTKFVEDHNHSLASHSKVHHLRPHRHFAGATRNASETFNATSDAYISTDGNHVFHEPTRVVRSSSPVDLNYRSRNTGPLMYIRPTRNRTLGRDAQNLLNYFKKMQAENPGFYYAIQLDDENRMTNVFWADARSRAAYNYFGDTVVFDTMYRPNQYQVPFAPFTGINHHGQMVLFGCALLLDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAIQVAVAHAFPGTRHCICKWHILREGQERLAHVYLAHPSFYGELYSCINFCETVEDFESTWNTLLDKYDLQKNEWLQAVFKARKQWAPVYFRGTFFAALTSNYRVSSFFDGYVNQQTNLPLFFKQYERALEQSLEKEIEADYDTICTTPVLKTPSPMEQQAANLYTKKIFAKFQEELVETFVYTADSIESDGVVSKYRVAKYEHDHKAYMVTLDASELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPPHYILKRWTRNAKLNMQSDDQISDSNAIETLTLRFNSLCHEAIKLAEEGAVAVETYNAAMNALREGGKKVSVVKKKVAKVTPPTPNAQGNGSNQEDHSKKSPLSMWQDPVSHCFNLNDIGLPVADLNQPRMAPVSIYRNGGPSDNPVVLIYFKSMSWVIENKNSISTTRAAVINLKLQDYGKNPPAENEVQFRVTRVTLEPMMRSMAYINQQLSTPVNKVAVINLKLQDTKTTTGETEVKFQVSRDTLGSMLKSMAYIRDQL 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0824 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 654 IPR031052 GO:0006355
Prci7g0824 845 ProSiteProfiles Zinc finger SWIM-type profile. 542 578 IPR007527 GO:0008270
Prci7g0824 845 MobiDBLite consensus disorder prediction 662 687 - -
Prci7g0824 845 Pfam FAR1 DNA-binding domain 59 134 IPR004330 -
Prci7g0824 845 SMART 26again6 553 580 IPR006564 GO:0008270
Prci7g0824 845 MobiDBLite consensus disorder prediction 1 23 - -
Prci7g0824 845 Pfam MULE transposase domain 265 357 IPR018289 -
Prci7g0824 845 MobiDBLite consensus disorder prediction 666 687 - -
Prci7g0824 845 Pfam SWIM zinc finger 544 576 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0824 Prci-Chr7 25593298 25603265 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci7g0824 MULE 3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0824 - - vvi:100267671 1338.94