LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g0755	ATGCCATATTTACAAGATTATGATGGTTTCCTTGGTGATTTTTCCCCCAGTAAACTGAAGGGTCTATCTGCAAAAATCTCATCATGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCCAAAGGGAAACTGTTTTCTTCACGGCCATCAGACATAGAGATTGATGGAAACTTAATAGATGACAGTAGTGAAACCAGTTGTTCGACCAGTAGCTCATTGAACTCTGCGTCCACCTCTCAGATAGACTATAGCTCAGTTGGATCGTATGCTTCTATACCTTCCTCTTCCCTAGCAGCACAGAGATATCAAGCTCTTTCAAGCATTAATCAGACCCTTCAAAGCACAAAATCTAGTTTAATTGAAAATGACCGCCCTAGAAGCCATTCCCTAGATCTTGGGATAGAGCAAACTGCTATATATTCTTCTACCAGAAACTCAGATGTTGGCTATGCTCTAAGCCGGGCTTCTAGTTACAAAAGCAATTTATCAGATGGCGAATCTTGGAATTATTATCAAAATCCCACCATGGATGCACCACTGGCATCTGTGTCGCCTGATAAGCAGGAAAATCTTAACGTTGAGCTGGAAAAGTTGAGAATTGAACTAAGGCATGCCCAAGGAATGCACATGGTAGCTCAAAGTCAGAGCAGTTATGCATCAAAAATGTTGAACAATCTAAGTAAGAAGAGAATCGAGGAATCTACGAAACTGAAGGAAATTATTGCAAAGGAGCACAAGGCCAAAAAATTAGTAATAAAGGAGAGAGAGAAATGTGAGACAGCAGAAAGAGAAGCTGCTTATTTGATAAGAAGTGCTGAAGAGGAAGCCTTTGAAAGAAGAGAAGCAGAGAAGAAAGCTGTCGAAGCTGCCAAAAGGAATGAAATGCTAGAGGATGCTCTTAGCGGTTCCCTGCCTCAGTATAAGAAGTTTACTTGGGATGAAATAGTGTCAGCTACCTCATCATTCTCTGAAGAGCTAAGAATTGGAAAAGGAGCATGTGGAACAGTTTACAAGTGCCATTTGTATCATACACCTGTGGCGGTAAAAGTTCTCCACACTAATGAGGACCACATTATCAAGCAACTCCAACGAGAGCTAGAAATACTGAGCACAGTTCGTCATCCAAATTTACTTCTTCTTCTTGGGGCATGTCCTGATCATGGTTGTCTTGTGTATGAATACATGGAGAATGGTAGCTTGGAGGACAGATTACTCCAAAATAACAGTAATATCTCAATCCCTTGGTTCAAGAGGTACCAAATTGCATTGGAAGTGGCCTCAGTGCTTGCCTTTCTTCATAGCTCAAAGCCCAAACCTATCATCCATCGTGATTTGAAACCGGCGAACATCTTGCTAGATCGAAATCTTGTGAGCAAGATTGGCGATATTGGCCTTTCTACGTTACTCTCTTCTGATACTTTGTCTACAATGTTCAAGGACACAGATCCTGTTGGGACGCTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGTTAATATCTCCCAAATCTGATGTATATGCTTTTGGAATGGTGATCCTGCAATTATTAACTGCAAAACCAGCTAGAGCGCTTACTCTTGTGGTAGAAACAGCAATTGACAAGGGAAATTTAGCTGAAATATTGGATCCTAAGGCAGGGAATTGGCCAATTCAGGACACTCTGGAATTAGCTCAATTAGGCCTAAGCTGCGCAGAACTTCGGCGCAGAGACAGACCTGATTTGAAAGATCATGTAATTCCCATAATGGAGAGATTAAAGGAAGTCGCTGATAGGGCTCAACATTCTGCCATAACTATTATTGTTAACTCTAGACCTCCTAATCACTTCATCTGCCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCTGATGGTTATACATATGATTACAAAGCTATTGTAACATGGTTGGAAAGGAATGACAAATCACCAATGACAAATATGCCTTTACCTCATAAGAATCTGATTCCCAATCACACACTTCTATCAGCTATTATGGAGTGGAAATCTGGAGAAAAATGA	2031	0.4097	MPYLQDYDGFLGDFSPSKLKGLSAKISSCTPRFCTVYAVSKGKLFSSRPSDIEIDGNLIDDSSETSCSTSSSLNSASTSQIDYSSVGSYASIPSSSLAAQRYQALSSINQTLQSTKSSLIENDRPRSHSLDLGIEQTAIYSSTRNSDVGYALSRASSYKSNLSDGESWNYYQNPTMDAPLASVSPDKQENLNVELEKLRIELRHAQGMHMVAQSQSSYASKMLNNLSKKRIEESTKLKEIIAKEHKAKKLVIKEREKCETAEREAAYLIRSAEEEAFERREAEKKAVEAAKRNEMLEDALSGSLPQYKKFTWDEIVSATSSFSEELRIGKGACGTVYKCHLYHTPVAVKVLHTNEDHIIKQLQRELEILSTVRHPNLLLLLGACPDHGCLVYEYMENGSLEDRLLQNNSNISIPWFKRYQIALEVASVLAFLHSSKPKPIIHRDLKPANILLDRNLVSKIGDIGLSTLLSSDTLSTMFKDTDPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPARALTLVVETAIDKGNLAEILDPKAGNWPIQDTLELAQLGLSCAELRRRDRPDLKDHVIPIMERLKEVADRAQHSAITIIVNSRPPNHFICPILQDVMDDPCVAADGYTYDYKAIVTWLERNDKSPMTNMPLPHKNLIPNHTLLSAIMEWKSGEK	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g0755	676	ProSiteProfiles	U-box domain profile.	605	676	IPR003613	GO:0004842\|GO:0016567
	Prci7g0755	676	Pfam	U-box domain	607	673	IPR003613	GO:0004842\|GO:0016567
	Prci7g0755	676	Gene3D	Transferase(Phosphotransferase) domain 1	395	604	-	-
	Prci7g0755	676	PANTHER	OS02G0152300 PROTEIN	22	670	-	-
	Prci7g0755	676	SMART	serkin_6	322	583	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g0755	676	SUPERFAMILY	RING/U-box	605	672	-	-
	Prci7g0755	676	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	605	676	IPR013083	-
	Prci7g0755	676	Coils	Coil	188	208	-	-
	Prci7g0755	676	SUPERFAMILY	Protein kinase-like (PK-like)	304	577	IPR011009	-
	Prci7g0755	676	Coils	Coil	273	299	-	-
	Prci7g0755	676	CDD	RING-Ubox_WDSUB1-like	607	661	-	-
	Prci7g0755	676	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	440	452	IPR008271	GO:0004672\|GO:0006468
	Prci7g0755	676	Pfam	Protein kinase domain	324	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g0755	676	SMART	Ubox_2	609	671	IPR003613	GO:0004842\|GO:0016567
	Prci7g0755	676	ProSiteProfiles	Protein kinase domain profile.	322	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g0755	676	Gene3D	Phosphorylase Kinase; domain 1	301	394	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g0755	Prci-Chr7	25124304	25132018	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g0755	17	673	U-box Gene Family	AT4G25160	49.576	0.0	644

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Prci7g0755		Pkinase	1.4e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g0755	-		-	gsj:114409387	848.58