Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0740 ATGGCAGCATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTTGTTCCCTCTTTTTTCGGTGTCCCTTCTAGCTATGTGAGGTCTGTTAATGTCCGTTGTTTCTATAAGTGTCAAAGAGTTTGGCTTCGGTCAAGCCGTCGTTTTGTTCCTCTACTTGCTTCGTCGTGCAGCAATTTTGAGTCTGTGGAACTGCAAGAAGCCCAGAATGCTGTTTCAAAACTTCTTCGAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATTGCATCTAATTCACCGAAGTATGTGAGGATGCTGGTTGATGAAGTACGGGATTTGGACGAACTTTCAATGTGGGAGACGCAAATTGGCGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGAAGAAAGGTGATAATGGCAAAGTTGTATACTTGGAGAGTCTGGGTTTGAGCCTCTCTTCAGCTATGAACGTGGCCAGATATCTGTCAGGAGAAACACTTGTAGCACTCATCCATAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCGGTCAGAAGAGTTCGCAATATGATGATGCAGTTATCTATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGACCATGTTGAATTCCAGTGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCAGTAAAATCTCACATGAAACCGTTAGTGGAATTTCTTGAGAGTGTTGGAATCCAAAGAGATCTCATGAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAAGTCGAATACTAGCCTTGAATGAGATTGGTGGTGTAAATAACAATCATGTTAAGTTGCTGATAAAATATCCATGGATATTATCAAAAAGCATTCAAGACAACTATAAGGAAATCCTCTCTTTGTTTGATTCGGAGAAGGTTCCCAAGGCATTTGTTGATCATGCAATCAAAAGCTGGCCCCATATCCTGGGCTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAGATAGGAGTTCAACAGAAGAAGTTAGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTGCAGAAGCCACAAGACTTTCTCCAGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGAAAATACTGGTTCGCTGCCCTGAAATCTTTGCTGCTTGCCCTGCCAAGACTCTCAAGAGAAAGATTGAGTTCCTCCATAGTATTGGTGTTTCTGAAGTTCACCTTCCTCGGGTCATAAAAAAGTATCCAGAACTTCTTGTGTCCGATCCAGACAGAACCATGCTACCTAGGTTGGTGTACTTGATGAAGTTAGGACTATCTGAAAGAGACATTGCATTGATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGCAGAATTTCTGGTGAACACAATGGAGAGGCCAGTGAAGGACGTGGTGGGATACCCCAGTGACAATGGGGATGTGCTTTCCGGATTGGGTTCTCAAGCTGCCATCTCTGCTTGTTTCTCTCCTAGATCGAAACGTCCCTGCGTCGAGGATGACTTTTTGTGTTTCTGGATAGTTTTTTGTCTCTGTTGTTGCCTTTGCTTGGCTTTTGTTTTGCTCTAG 1749 0.4231 MAACCPSCSKFTPSSFLPHSSLVPSFFGVPSSYVRSVNVRCFYKCQRVWLRSSRRFVPLLASSCSNFESVELQEAQNAVSKLLREFGVSEEESNSIASNSPKYVRMLVDEVRDLDELSMWETQIGGFQEKVVHIARKKGDNGKVVYLESLGLSLSSAMNVARYLSGETLVALIHKVKCMKELFFSGSESYEFPVRRVRNMMMQLSIPIDEDLQQTLSFFEKVEARRGGLTMLNSSDAAFDFLIESFPRLLLLSVKSHMKPLVEFLESVGIQRDLMRNILLTFPPSLLWNIEVFKSRILALNEIGGVNNNHVKLLIKYPWILSKSIQDNYKEILSLFDSEKVPKAFVDHAIKSWPHILGCSSSKLKLMVDQFGEIGVQQKKLGQVIAKSPQLLLQKPQDFLQVVLFFENMGFDRQTIGKILVRCPEIFAACPAKTLKRKIEFLHSIGVSEVHLPRVIKKYPELLVSDPDRTMLPRLVYLMKLGLSERDIALMVRSFSPLLGYSIEEVLRPKAEFLVNTMERPVKDVVGYPSDNGDVLSGLGSQAAISACFSPRSKRPCVEDDFLCFWIVFCLCCCLCLAFVLL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0740 582 Coils Coil 72 92 - -
Prci7g0740 582 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 Gene3D Transcription termination factor 3, mitochondrial 361 531 IPR038538 -
Prci7g0740 582 PANTHER CGI-12 PROTEIN-RELATED 349 530 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 Pfam mTERF 262 530 IPR003690 GO:0003690|GO:0006355
Prci7g0740 582 Pfam mTERF 78 296 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0740 Prci-Chr7 25074034 25080641 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci7g0740 mTERF 9.8e-76 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0740 K15031 - qsa:O6P43_022473 624.78